Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq36 179 5e-40 seq33 167 3e-36 >seq36 Length=2033623 Score = 179 bits (198), Expect = 5e-40 Identities = 219/296 (74%), Gaps = 7/296 (2%) Strand=Plus/Minus Query 46925 TTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 46984 |||| |||||||| |||||||| || || || || || || |||||||| ||||| | | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 46985 TCTGTACCTCTGTACAAAATC--GTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042 | || || || | |||| ||| | | ||| ||||| || || ||||| ||| Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTT--GCTAGATTTTCATTAACAATACCATCTGAAGC 729646 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATT--- 47099 ||||||||||| ||||||| ||| |||| |||||||| | | | ||||| Sbjct 729645 TGCAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTC 729586 Query 47100 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 ||| ||||||||||| | | || ||| | ||||| |||||||||||||| || ||||| Sbjct 729585 CCATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGC 729526 Query 47160 TTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTAT 47215 || |||||||||||||||||| || | |||| || ||||| | ||||||||||| Sbjct 729525 TTGTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTAT 729470 Score = 145 bits (160), Expect = 1e-29 Identities = 396/593 (67%), Gaps = 25/593 (4%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTC--TCGAAAAAATTAGTTTTGCCTTCCAATGATATAT 46396 ||||| |||||| |||| || | || ||||| || | ||| | || ||| || || Sbjct 730408 TTTTGATATTCAGCTACT--TTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATCA 730351 Query 46397 TTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAA 46456 ||||||| |||| || ||||| ||| |||| |||| ||||| | || || || | Sbjct 730350 TTTCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACC-AAGAGAGACA 730292 Query 46457 TC-AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATG 46515 | || | |||||| || || || || | ||| | | ||||| || ||| Sbjct 730291 ACTAGACGATCTGCGCAAAACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAATG 730232 Query 46516 AGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCC--GATA 46573 || | || ||||||| || || | ||| || | |||| | |||||||| |||| Sbjct 730231 AGATCAACTGGTAGAGATTCAGTTACAAATTCCTTTTCACATGCAACAGCATCTTTGATA 730172 Query 46574 TTATCGATGTT-ACTGTTTCCTC-ACTTGGTGGATGCATCAAATGTTTAAACATTAAACA 46631 | || || | | | |||| || | | | | | | | ||| | | ||||| Sbjct 730171 ATGTCTATAATGATTTTTTCATCTAATCTATTTACGAGTTTACTGT----AGAGCAAACA 730116 Query 46632 TGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCC 46691 ||||| | |||||| || |||||||| | |||||| ||||| || || ||||| | || Sbjct 730115 AGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAACC 730056 Query 46692 AGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATAT 46751 ||||||| || | || || |||||||| || | |||| ||| || || || Sbjct 730055 TGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTACCACTGAAAAAGAT 729996 Query 46752 GCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATC-ATTATGAATCC 46810 ||||| ||||| || ||||| || | ||||||| | || || ||| | || |||| Sbjct 729995 ACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGC--AAATG--ATCTAGAATTGATCC 729940 Query 46811 ACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 46870 | || ||||| || ||||| || || ||||| || || |||||||||||||| || Sbjct 729939 ATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATT---GA 729883 Query 46871 GAAAGtt---tttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTA 46920 || || ||||| || | ||||| ||||||||| |||||||||||| Sbjct 729882 ATAATTTAGCTTTTTGTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830 >seq33 Length=884058 Score = 167 bits (184), Expect = 3e-36 Identities = 419/632 (66%), Gaps = 6/632 (1%) Strand=Plus/Minus Query 76559 TCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCA 76618 ||||| ||||| | | ||||| || ||| | | ||| |||| ||||||||||||| Sbjct 110914 TCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGAACACGTTCCATAAAGAGATCA 110855 Query 76619 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTT 76678 ||||| || ||| |||| || || | | | ||||| || || ||| || Sbjct 110854 CAAATCCAAAGGGCATAGAATAAGTCACGAGCACGAATCTCTTCCTTACCATGATTTTTC 110795 Query 76679 TTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACA 76738 || ||||| | |||||| | | ||||| |||||||| |||| |||| || | | || Sbjct 110794 TTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGGCTCTAAGTATACTGCAAAAGCA 110735 Query 76739 CCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAAC 76798 || || ||| ||||| || |||| ||| | ||||||| ||| | || | ||| Sbjct 110734 CCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGCAGTGTCGTTAAATACACGTAAC 110675 Query 76799 ATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGA 76858 ||||| | | || || || || || || |||||| ||||| | | |||||| Sbjct 110674 ATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACGGATATAGGATTGAGCAGCACGA 110615 Query 76859 ATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTC 76918 || || || | | || ||||| || || |||| || | || || ||||| Sbjct 110614 ATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTTACTAATCAATGCGCATTGTTTC 110555 Query 76919 AATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAA-GAAGAAAACAGCTAGA 76977 || || || ||||| || || || ||| || |||| | || |||||| || | || Sbjct 110554 AAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCATTTGAACCAAGAAACAAGAT-GA 110496 Query 76978 CATTTGATG--ATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCAT 77035 ||| ||| | ||| || || ||||| ||||||||||||| |||||||| ||| | Sbjct 110495 CATCTGAGGGAATG--GTGTACCAGCATTGAACAATGTAGGAGTAGCATGAGTAAACAAC 110438 Query 77036 TTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCT 77095 || || || | || || |||| | | || | | || | ||| || || Sbjct 110437 TTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCAAGTCAGTTCCATGTATACCA 110378 Query 77096 ACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAAC 77155 | || ||| | |||||||||||| ||||||| ||| ||| | || ||| || | Sbjct 110377 ATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAATGATACCATTGATACGTTGC 110318 Query 77156 AAGTATGATTTTTCCAAAGTTTTAAAACCAAA 77187 || |||||| |||||||||| ||||||||||| Sbjct 110317 AAATATGATCTTTCCAAAGTCTTAAAACCAAA 110286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933918769280