Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04]
54 sequences; 23,375,662 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq30 123 2e-23
seq27 122 7e-23
seq31 116 3e-21
seq38 93.3 4e-14
seq12 91.5 1e-13
>seq30
Length=714265
Score = 123 bits (136), Expect = 2e-23
Identities = 154/210 (73%), Gaps = 1/210 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCA-TTACCGTGGAAACGGAACCCAG 111158
|||||||||||||||||||| ||||| || ||||||| ||||| ||||| |||
Sbjct 356320 ATGCAAATTTTTGTCAAAACCTTGACTGGTAAAACCAATTACCTTGGAAGTTGAAGGATC 356379
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| || ||| | || || || ||| || |||||||| | || ||||||
Sbjct 356380 AGATACTATTGAGAATGTCAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGATCA 356439
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
|||||| ||||||| ||| || ||||||||||||||| | ||| | | || || ||
Sbjct 356440 ACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTACAA 356499
Query 111279 TATACAAAAAGAATCTACACTACATTTAGT 111308
||| ||||| ||||| || || ||||||||
Sbjct 356500 TATTCAAAAGGAATCAACTCTCCATTTAGT 356529
Score = 107 bits (118), Expect = 2e-18
Identities = 168/239 (70%), Gaps = 1/239 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||| ||||| || || | || || |||||||||||| ||||| |||
Sbjct 356549 ATGCAAATCTTTGTAAAGACTCTTACAGGTAAAACCATTACCTTGGAAGTTGAAGGATCA 356608
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| || ||| | || || || ||| || |||||||| | || ||| |||
Sbjct 356609 GATACTATTGAGAATGTTAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGACCAA 356668
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||| || |||| ||| || ||||||||||||||| | ||| | | || || |||
Sbjct 356669 CAAAGACTCATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCTGACTACAAT 356728
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA-TAAATAAA 111337
|| |||||||||||||| || |||||||| | | || | ||||| || |||| |||
Sbjct 356729 ATCCAAAAAGAATCTACTCTCCATTTAGTACTCAGACTTAGAGGTGGTAACTAAAAAAA 356787
>seq27
Length=1864556
Score = 122 bits (134), Expect = 7e-23
Identities = 171/239 (72%), Gaps = 1/239 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| || || || || || ||||| |||||| | ||| |||
Sbjct 1695937 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1695878
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| || ||| | |||||| |||||| || |||||||| | || ||| |||
Sbjct 1695877 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACCCGACCAA 1695818
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||| ||||||| ||| || |||||||| |||||| || |||| | |||| |||||
Sbjct 1695817 CAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCCGACTATAAC 1695758
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA-TAAATAAA 111337
|| ||||||||||| || || || || || | | | | ||||| || ||||||||
Sbjct 1695757 ATTCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTAAGAGGTGGTAATTAAATAAA 1695699
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 111093 TTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGA 111152
||||| ||||||||| ||||| ||||| || || || ||||| |||||| | ||| ||
Sbjct 1696172 TTTAATAATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACTATTACCTTAGAAGTTGA 1696113
Query 111153 ACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGT 111212
| | || | ||| | ||||| |||||| || |||||||| | ||
Sbjct 1696112 AGGCTCAGACACCATTGAAAACGTAAAGGCCAAAATTCAAGATAAAGAAGGTATCCCACC 1696053
Query 111213 CGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 111272
||| |||||||| ||||||| || || |||||||| ||||| | ||| | ||||
Sbjct 1696052 CGACCAACAAAGACTTATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTCTTTCCGA 1695993
Query 111273 TTATAATATACAAAAAGAATCTACACTACATTTAGT 111308
|||||| || ||||||||||| ||| ||||||||||
Sbjct 1695992 TTATAACATCCAAAAAGAATCAACATTACATTTAGT 1695957
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156
||||||||||||||||| ||||| || || || ||||| |||||| | ||| |||
Sbjct 1617275 AAAATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACTATTACCTTAGAAGTCGAAGGT 1617334
Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216
||| | ||| | || ||| |||||| || |||||||| |||| ||||
Sbjct 1617335 TCCGACACCATTGAAAATGTCAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCCGAT 1617394
Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276
|||||||| | || | ||| || |||||||| |||||| | ||| | | |||||
Sbjct 1617395 CAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGATTAC 1617454
Query 111277 AATATACAAAAAGAATCTACACTACATTTAGT 111308
|| || ||||||||||| ||| ||||||||||
Sbjct 1617455 AACATTCAAAAAGAATCAACATTACATTTAGT 1617486
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| ||||| ||||| || |||||||||||| | ||| ||| |
Sbjct 1617734 ATGCAAATTTTTGTTAAAACTTTGACTGGTAAAACCATTACCTTAGAAGTAGAAGGTTCC 1617793
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | ||||| |||||| ||||||||||| | || ||| |||
Sbjct 1617794 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 1617853
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||| || |||| || || |||||||| |||||| | ||| | | ||||| ||
Sbjct 1617854 CAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 1617913
Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308
|| ||||||||||| || || ||||||||
Sbjct 1617914 ATCCAAAAAGAATCAACCCTCCATTTAGT 1617942
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| || || || || || ||||| |||||| | ||| |||
Sbjct 1617506 ATGCAAATTTTTGTAAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1617565
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | |||||| |||||| ||||||||||| |||| |||||||
Sbjct 1617566 GACACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGATCAA 1617625
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||| ||||||| || || |||||||| ||||| || ||| | | ||||||||
Sbjct 1617626 CAAAGACTTATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACATTATCTGATTATAAC 1617685
Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308
|| ||||||||||| || || || || ||
Sbjct 1617686 ATTCAAAAAGAATCCACTCTTCACTTGGT 1617714
Score = 107 bits (118), Expect = 2e-18
Identities = 168/239 (70%), Gaps = 1/239 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| || || ||||| || ||||| |||||| | ||| |||
Sbjct 1617962 ATGCAAATTTTTGTAAAGACCTTGACTGGTAAAACTATTACCCTTGAAGTTGAAGGTTCA 1618021
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | |||||| |||||| ||||||||||| |||| ||| |||
Sbjct 1618022 GATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGACCAA 1618081
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||| | || | ||| || |||||||| |||||| | || | | ||||| ||
Sbjct 1618082 CAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACCCTCTCTGATTACAAC 1618141
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA-TAAATAAA 111337
|| ||||||||||| || || |||||||| | | | | ||||| || ||||||||
Sbjct 1618142 ATTCAAAAAGAATCCACTCTCCATTTAGTTCTCAGATTAAGAGGTGGTAATTAAATAAA 1618200
>seq31
Length=145395
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||| ||||||||||| ||||| || || || |||||| | ||| |||
Sbjct 8495 ATGCAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACCTTAGAAGTTGAAGGTTCT 8436
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | || ||| || || || |||||||| |||| ||| |||
Sbjct 8435 GACACCATTGAGAATGTTAAAACCAAGATCCAAGATAAAGAAGGTATTCCACCCGACCAA 8376
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||| ||||||| ||| || ||||||||||||||| | ||| | | || ||||||
Sbjct 8375 CAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTATAAT 8316
Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308
|||||||||||||| || || ||||||||
Sbjct 8315 ATACAAAAAGAATCAACTCTCCATTTAGT 8287
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||| ||||||||||| ||||| || || || ||||| ||||| |||
Sbjct 8038 ATGCAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTCT 7979
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | ||||| |||||| ||||||||||| | || ||| |||
Sbjct 7978 GATACCATTGAAAATGTAAAGACCAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 7919
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||| ||||| | ||| || |||||| | || ||| | ||| | | ||||| ||
Sbjct 7918 CAAAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTCTCTGATTACAAC 7859
Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308
|| ||||||||||| ||||| ||||||||
Sbjct 7858 ATTCAAAAAGAATCAACACTCCATTTAGT 7830
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111082 ATTTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACC 111141
|| ||| ||| | || |||||||| ||||| || || ||||| || || || ||||||
Sbjct 8741 ATATATTAGAAATAAATTATGCAAATATTTGTAAAGACTTTGACTGGTAAGACAATTACC 8682
Query 111142 GTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAA 111201
| || ||| ||| | ||| | || ||| ||||| || |||||
Sbjct 8681 TTAGAGGTAGAAGGTTCTGATACCATTGAAAATGTTAAAACCAAAATCCAAGATAAAGAG 8622
Query 111202 GGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAA 111261
|| | || ||| |||||||| ||||||| ||| || ||||||||||||||| |
Sbjct 8621 GGTATCCCACCCGACCAACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGT 8562
Query 111262 ACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGT 111308
||| | | || ||||| || ||||||||||| ||||||||||||||
Sbjct 8561 ACTTTATCTGACTATAACATTCAAAAAGAATCAACACTACATTTAGT 8515
Score = 100 bits (110), Expect = 2e-16
Identities = 149/210 (71%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAA-CGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
|||||| |||||||||||| | ||||| || || || ||||| ||||| |||
Sbjct 8267 ATGCAATTTTTTGTCAAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTC 8208
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| | ||| | || ||| ||| || || |||||||| |||| ||||||
Sbjct 8207 TGATACCATTGAAAATGTTAAAACAAAGATCCAAGATAAAGAAGGTATTCCACCCGATCA 8148
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
|||| | || |||| ||| || ||||||||||||||| | || | | || |||||
Sbjct 8147 ACAACGTCTCATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACCTTATCTGACTATAA 8088
Query 111279 TATACAAAAAGAATCTACACTACATTTAGT 111308
|||||||| ||||| || || ||||||||
Sbjct 8087 CATACAAAAGGAATCAACTCTCCATTTAGT 8058
>seq38
Length=878590
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| || || || || || || ||||||||| | ||| ||| |
Sbjct 148640 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAGACCATTACCCTTGAAGTTGAAGGTTCC 148699
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | ||||| || ||| ||||||||||| | || ||| |||
Sbjct 148700 GACACCATTGAAAACGTAAAGGCTAAGATTCAAGACAAAGAAGGTATCCCACCCGACCAA 148759
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||| || |||| || || |||||||| |||||| | ||| | | ||||| ||
Sbjct 148760 CAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 148819
Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308
|| ||||||||||| || || ||||| ||
Sbjct 148820 ATCCAAAAAGAATCAACCCTCCATTTGGT 148848
>seq12
Length=1224149
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
|||||| ||||| || ||||| || || || || ||||||||| | ||| |||
Sbjct 427190 AATGCAGATTTTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAAGGTTC 427249
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| | | | | || || ||||| ||||||||||| | || ||||||
Sbjct 427250 AGATACCATCGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCACCCGATCA 427309
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
|||||| ||||| | ||| || |||||||| ||||| | || | | ||||| ||
Sbjct 427310 ACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGACGGTCGTACCCTCTCTGATTACAA 427369
Query 111279 TATACAAAAAGAATCTACACTACATTTAGT 111308
||| ||||||||||| || || ||||||||
Sbjct 427370 TATCCAAAAAGAATCAACCCTCCATTTAGT 427399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421810922395504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |