Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq30 123 2e-23 seq27 122 7e-23 seq31 116 3e-21 seq38 93.3 4e-14 seq12 91.5 1e-13 >seq30 Length=714265 Score = 123 bits (136), Expect = 2e-23 Identities = 154/210 (73%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCA-TTACCGTGGAAACGGAACCCAG 111158 |||||||||||||||||||| ||||| || ||||||| ||||| ||||| ||| Sbjct 356320 ATGCAAATTTTTGTCAAAACCTTGACTGGTAAAACCAATTACCTTGGAAGTTGAAGGATC 356379 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| || ||| | || || || ||| || |||||||| | || |||||| Sbjct 356380 AGATACTATTGAGAATGTCAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGATCA 356439 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||||| ||||||| ||| || ||||||||||||||| | ||| | | || || || Sbjct 356440 ACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTACAA 356499 Query 111279 TATACAAAAAGAATCTACACTACATTTAGT 111308 ||| ||||| ||||| || || |||||||| Sbjct 356500 TATTCAAAAGGAATCAACTCTCCATTTAGT 356529 Score = 107 bits (118), Expect = 2e-18 Identities = 168/239 (70%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| || || | || || |||||||||||| ||||| ||| Sbjct 356549 ATGCAAATCTTTGTAAAGACTCTTACAGGTAAAACCATTACCTTGGAAGTTGAAGGATCA 356608 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | || || || ||| || |||||||| | || ||| ||| Sbjct 356609 GATACTATTGAGAATGTTAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCCGACCAA 356668 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| || |||| ||| || ||||||||||||||| | ||| | | || || ||| Sbjct 356669 CAAAGACTCATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCTGACTACAAT 356728 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA-TAAATAAA 111337 || |||||||||||||| || |||||||| | | || | ||||| || |||| ||| Sbjct 356729 ATCCAAAAAGAATCTACTCTCCATTTAGTACTCAGACTTAGAGGTGGTAACTAAAAAAA 356787 >seq27 Length=1864556 Score = 122 bits (134), Expect = 7e-23 Identities = 171/239 (72%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| || || || || || ||||| |||||| | ||| ||| Sbjct 1695937 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1695878 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | |||||| |||||| || |||||||| | || ||| ||| Sbjct 1695877 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACCCGACCAA 1695818 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| ||||||| ||| || |||||||| |||||| || |||| | |||| ||||| Sbjct 1695817 CAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCCGACTATAAC 1695758 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA-TAAATAAA 111337 || ||||||||||| || || || || || | | | | ||||| || |||||||| Sbjct 1695757 ATTCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTAAGAGGTGGTAATTAAATAAA 1695699 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 111093 TTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGA 111152 ||||| ||||||||| ||||| ||||| || || || ||||| |||||| | ||| || Sbjct 1696172 TTTAATAATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACTATTACCTTAGAAGTTGA 1696113 Query 111153 ACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGT 111212 | | || | ||| | ||||| |||||| || |||||||| | || Sbjct 1696112 AGGCTCAGACACCATTGAAAACGTAAAGGCCAAAATTCAAGATAAAGAAGGTATCCCACC 1696053 Query 111213 CGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 111272 ||| |||||||| ||||||| || || |||||||| ||||| | ||| | |||| Sbjct 1696052 CGACCAACAAAGACTTATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTCTTTCCGA 1695993 Query 111273 TTATAATATACAAAAAGAATCTACACTACATTTAGT 111308 |||||| || ||||||||||| ||| |||||||||| Sbjct 1695992 TTATAACATCCAAAAAGAATCAACATTACATTTAGT 1695957 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 ||||||||||||||||| ||||| || || || ||||| |||||| | ||| ||| Sbjct 1617275 AAAATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACTATTACCTTAGAAGTCGAAGGT 1617334 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 ||| | ||| | || ||| |||||| || |||||||| |||| |||| Sbjct 1617335 TCCGACACCATTGAAAATGTCAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCCGAT 1617394 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 |||||||| | || | ||| || |||||||| |||||| | ||| | | ||||| Sbjct 1617395 CAACAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGATTAC 1617454 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGT 111308 || || ||||||||||| ||| |||||||||| Sbjct 1617455 AACATTCAAAAAGAATCAACATTACATTTAGT 1617486 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| ||||| ||||| || |||||||||||| | ||| ||| | Sbjct 1617734 ATGCAAATTTTTGTTAAAACTTTGACTGGTAAAACCATTACCTTAGAAGTAGAAGGTTCC 1617793 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | ||||| |||||| ||||||||||| | || ||| ||| Sbjct 1617794 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 1617853 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| || |||| || || |||||||| |||||| | ||| | | ||||| || Sbjct 1617854 CAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 1617913 Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308 || ||||||||||| || || |||||||| Sbjct 1617914 ATCCAAAAAGAATCAACCCTCCATTTAGT 1617942 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| || || || || || ||||| |||||| | ||| ||| Sbjct 1617506 ATGCAAATTTTTGTAAAGACCTTAACTGGTAAAACAATTACCCTTGAAGTTGAAGGTTCA 1617565 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | |||||| |||||| ||||||||||| |||| ||||||| Sbjct 1617566 GACACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGATCAA 1617625 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| ||||||| || || |||||||| ||||| || ||| | | |||||||| Sbjct 1617626 CAAAGACTTATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACATTATCTGATTATAAC 1617685 Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308 || ||||||||||| || || || || || Sbjct 1617686 ATTCAAAAAGAATCCACTCTTCACTTGGT 1617714 Score = 107 bits (118), Expect = 2e-18 Identities = 168/239 (70%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| || || ||||| || ||||| |||||| | ||| ||| Sbjct 1617962 ATGCAAATTTTTGTAAAGACCTTGACTGGTAAAACTATTACCCTTGAAGTTGAAGGTTCA 1618021 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | |||||| |||||| ||||||||||| |||| ||| ||| Sbjct 1618022 GATACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCACCCGACCAA 1618081 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | || | ||| || |||||||| |||||| | || | | ||||| || Sbjct 1618082 CAAAGATTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACCCTCTCTGATTACAAC 1618141 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA-TAAATAAA 111337 || ||||||||||| || || |||||||| | | | | ||||| || |||||||| Sbjct 1618142 ATTCAAAAAGAATCCACTCTCCATTTAGTTCTCAGATTAAGAGGTGGTAATTAAATAAA 1618200 >seq31 Length=145395 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||||||||| ||||| || || || |||||| | ||| ||| Sbjct 8495 ATGCAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACCTTAGAAGTTGAAGGTTCT 8436 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | || ||| || || || |||||||| |||| ||| ||| Sbjct 8435 GACACCATTGAGAATGTTAAAACCAAGATCCAAGATAAAGAAGGTATTCCACCCGACCAA 8376 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| ||||||| ||| || ||||||||||||||| | ||| | | || |||||| Sbjct 8375 CAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTATAAT 8316 Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308 |||||||||||||| || || |||||||| Sbjct 8315 ATACAAAAAGAATCAACTCTCCATTTAGT 8287 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||||||||| ||||| || || || ||||| ||||| ||| Sbjct 8038 ATGCAAATCTTTGTCAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTCT 7979 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | ||||| |||||| ||||||||||| | || ||| ||| Sbjct 7978 GATACCATTGAAAATGTAAAGACCAAAATTCAAGACAAAGAAGGTATCCCACCCGACCAA 7919 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| ||||| | ||| || |||||| | || ||| | ||| | | ||||| || Sbjct 7918 CAAAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTCTCTGATTACAAC 7859 Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308 || ||||||||||| ||||| |||||||| Sbjct 7858 ATTCAAAAAGAATCAACACTCCATTTAGT 7830 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111082 ATTTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACC 111141 || ||| ||| | || |||||||| ||||| || || ||||| || || || |||||| Sbjct 8741 ATATATTAGAAATAAATTATGCAAATATTTGTAAAGACTTTGACTGGTAAGACAATTACC 8682 Query 111142 GTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAA 111201 | || ||| ||| | ||| | || ||| ||||| || ||||| Sbjct 8681 TTAGAGGTAGAAGGTTCTGATACCATTGAAAATGTTAAAACCAAAATCCAAGATAAAGAG 8622 Query 111202 GGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAA 111261 || | || ||| |||||||| ||||||| ||| || ||||||||||||||| | Sbjct 8621 GGTATCCCACCCGACCAACAAAGACTTATTTTTGCTGGTAAACAATTGGAAGATGGTCGT 8562 Query 111262 ACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGT 111308 ||| | | || ||||| || ||||||||||| |||||||||||||| Sbjct 8561 ACTTTATCTGACTATAACATTCAAAAAGAATCAACACTACATTTAGT 8515 Score = 100 bits (110), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAA-CGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| |||||||||||| | ||||| || || || ||||| ||||| ||| Sbjct 8267 ATGCAATTTTTTGTCAAAAACATTGACTGGTAAGACAATTACTTTGGAAGTTGAAGGTTC 8208 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||| || || |||||||| |||| |||||| Sbjct 8207 TGATACCATTGAAAATGTTAAAACAAAGATCCAAGATAAAGAAGGTATTCCACCCGATCA 8148 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||| | || |||| ||| || ||||||||||||||| | || | | || ||||| Sbjct 8147 ACAACGTCTCATTTTTGCTGGTAAACAATTGGAAGATGGTCGTACCTTATCTGACTATAA 8088 Query 111279 TATACAAAAAGAATCTACACTACATTTAGT 111308 |||||||| ||||| || || |||||||| Sbjct 8087 CATACAAAAGGAATCAACTCTCCATTTAGT 8058 >seq38 Length=878590 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| || || || || || || ||||||||| | ||| ||| | Sbjct 148640 ATGCAAATTTTTGTTAAGACCTTAACTGGTAAGACCATTACCCTTGAAGTTGAAGGTTCC 148699 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | ||||| || ||| ||||||||||| | || ||| ||| Sbjct 148700 GACACCATTGAAAACGTAAAGGCTAAGATTCAAGACAAAGAAGGTATCCCACCCGACCAA 148759 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| || |||| || || |||||||| |||||| | ||| | | ||||| || Sbjct 148760 CAAAGACTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 148819 Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308 || ||||||||||| || || ||||| || Sbjct 148820 ATCCAAAAAGAATCAACCCTCCATTTGGT 148848 >seq12 Length=1224149 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| ||||| || ||||| || || || || ||||||||| | ||| ||| Sbjct 427190 AATGCAGATTTTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAAGGTTC 427249 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | | | | || || ||||| ||||||||||| | || |||||| Sbjct 427250 AGATACCATCGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCACCCGATCA 427309 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||||| ||||| | ||| || |||||||| ||||| | || | | ||||| || Sbjct 427310 ACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGACGGTCGTACCCTCTCTGATTACAA 427369 Query 111279 TATACAAAAAGAATCTACACTACATTTAGT 111308 ||| ||||||||||| || || |||||||| Sbjct 427370 TATCCAAAAAGAATCAACCCTCCATTTAGT 427399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421810922395504