Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq36 152 5e-32 seq27 109 6e-19 >seq36 Length=2033623 Score = 152 bits (168), Expect = 5e-32 Identities = 211/295 (72%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 23807 TTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACA 23866 |||||||||||||||||||||| ||||| || || ||||| |||||||| ||||| | | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 23867 ATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAG 23926 |||||| ||| | | |||| | | |||| |||||| |||||||||||||| ||| | Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTTGCTAGATTTTCATTAACAATACCATCTGAAGCTG 729644 Query 23927 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAATTTTTTCC 23983 |||| || || | |||| || |||||| ||||| ||| || | |||| || Sbjct 729643 CAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTCCC 729584 Query 23984 AATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCAC 24043 | ||||| ||||| | | |||||||| || || ||||||| || || || Sbjct 729583 ATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGCTT 729524 Query 24044 GCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCTATC 24098 | |||||||| ||| || || | || |||||||||| || |||||||| Sbjct 729523 GTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTATC 729469 Score = 129 bits (142), Expect = 6e-25 Identities = 210/299 (70%), Gaps = 10/299 (3%) Strand=Plus/Minus Query 23506 AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTT 23565 ||||| ||||| | ||||||||| |||||||| | ||||||||||||||| || ||||| Sbjct 730120 AAACAAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTC 730061 Query 23566 AATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTG--CAGCAAATGATCCGGAAA 23623 || ||||||||||| |||| ||| || | |||||| || | ||| || | | |||| Sbjct 730060 AAACCTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTACCACTGAAA 730001 Query 23624 AGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAAT 23683 || ||||| |||||||| ||||| ||||| | | |||||| | || ||| Sbjct 730000 --AAGATACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAATGAT---CTAGAAT 729946 Query 23684 CAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTG 23743 |||||| | | ||| | |||||| ||| ||||| ||| ||||| || | Sbjct 729945 ---TGATCCATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAG 729889 Query 23744 CTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTA 23802 | || || | || ||||| ||| | | | |||||||||||||||| | |||| Sbjct 729888 CATTGAATAATTTAGCTTTTTGTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830 >seq27 Length=1864556 Score = 109 bits (120), Expect = 6e-19 Identities = 205/300 (68%), Gaps = 10/300 (3%) Strand=Plus/Minus Query 64426 TGATGTTATTGGAATTGATGAAGGGCAATTTTTTACTGATATAGTTGAATTTTCTGAAAA 64485 |||||| ||||| ||||| ||||| || ||||| | ||| | || || || ||| | Sbjct 792288 TGATGTAATTGGCATTGACGAAGGTCAGTTTTTCCCAGATGTTGTGGATTTCAGTGAGGA 792229 Query 64486 TATGGCCAATAAAGGAAAAATTGTAATTGTTTCAGCGTTAGATGCGACATATAAAAGAGA 64545 | | ||||||||||| ||||||||||| || |||| |||||| |||| | ||||| | Sbjct 792228 TCTTGCCAATAAAGGTAAAATTGTAATCATTGCAGCTCTAGATGGAACATTTCAAAGAAA 792169 Query 64546 ACCATTTGGTAATATCCTAAATCTAGTTCCATTAGCTGAAAAAGTAATAAAATTAAATGC 64605 |||||| | || ||||||| || ||| || | | | ||| | | ||| Sbjct 792168 ACCATTCCCAACCATTTTAAATCTCATTGGTAAAGCAGAGGATATTACCAAACTGACTGC 792109 Query 64606 TATATGTAAAATATGTTTCAAAGATGCTGCATTTACTAAAAGA-----TTATGCAAAAGT 64660 | |||| | ||||| || ||||||||||| | |||||| || || || Sbjct 792108 AGTTTGTATGGTTTGTTTTAATGATGCTGCATTCTCAAAAAGAACCGTTTCTGATGAA-- 792051 Query 64661 ACTGAAATCGAATTAATTGGTGGAGAGGACAAATATAGTTCCGTGTGTAGAAAGTGTTAT 64720 ||| | ||||| |||||||| || ||||||| ||| || ||||||| |||||| Sbjct 792050 TCTG---TAGAATTGATTGGTGGTACTGATAAATATATTTCAGTTTGTAGAAGTTGTTAT 791994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487647995600