Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq689 107 2e-18 >seq689 Length=46727 Score = 107 bits (118), Expect = 2e-18 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 |||||| || || ||||| || || || ||||| | |||||| | ||||| ||||| || Sbjct 18319 CAGACAGGCAAAGTCGCAGTGCAAACCTTCGTCACGGCTGATCAACTCGTTGGAAAAGGT 18260 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 ||| || |||||| ||| || ||||| | |||||| || | ||| ||||| || Sbjct 18259 CAAACCTGGCATCAATCCACGCTTCTTGAGCCAAAAGATTGAACAGAAACTACCAGAGAA 18200 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGC 17121 || ||||||||||||| ||||||||| | || || ||||| Sbjct 18199 AAAGATACCCTCGACGGCTGCAAACGCCACCAAACGCTCGGC 18158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517454997173400