Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq1417 2450 0.0 seq2164 120 2e-23 seq122 113 3e-21 >seq1417 Length=11336 Score = 2450 bits (2716), Expect = 0.0 Identities = 2164/2701 (80%), Gaps = 4/2701 (0%) Strand=Plus/Plus Query 4604 aaaaaaaGACCGGCAGATGCCGGTCAGGTGGGTCAGGCTGTTGTAGGGTCGTCACATTTT 4663 |||||||||||||| |||||||||||| | | | ||||| |||||||| Sbjct 1415 AAAAAAAGACCGGCGATTGCCGGTCAGGTTATTTCGCTAGG----GGGTCATCACATTTC 1470 Query 4664 GGCAGCCAGTCGCCGTAGCTTTCCTCTTTCAGCGTCAGGTTGGTCTGTATCCCCTGTTTG 4723 |||||||||||| ||| |||||||||| | | || || ||||| ||||| ||||| || Sbjct 1471 GGCAGCCAGTCGGCGTTGCTTTCCTCTCTTAACGCGAGATTGGTTTGTATGCCCTGATTT 1530 Query 4724 GTATGGCGTTTCTCGTAATTCAGTCCGTATTCCTTCAGCATCACCGGCAGCCCCAGCCCG 4783 | |||| ||||| ||| | || ||||| || |||||||| | |||| |||| || Sbjct 1531 TTTCGGCGCTTCTCATAACTTAGCCCGTACTCTTTCAGCATGGCTGGCATCCCCTTACCA 1590 Query 4784 AACATTTTCAGACTGAGTACATTCCGGTAGCCGTTTGCCTCCATGTAGGCCAGATAGGCG 4843 ||||| | || ||||| ||||| |||||||| || ||||| || ||||||||||| Sbjct 1591 AACATGGTGAGGCTGAGAGTATTCCTGTAGCCGTGGGCTTCCATATACGCCAGATAGGCA 1650 Query 4844 TGATAGAGGTATTTACGGTAATTGCGCGGGATGATACTGGCGTTCCCCATATACATGCCG 4903 ||||| || || || | ||||| ||||| |||| || || |||||||| || Sbjct 1651 TGATACAGATACAGGCGCGGCTGACGCGGAATGATGTTGGCATTGCCAATATACATACCC 1710 Query 4904 CTGGTCTGCGGCAGGGTTTCCAGATAGCCGATAAAATCAAACGTCGGGTCGGCATCCCGT 4963 | || |||||| | ||||||||||| ||||||||| |||||||| || || || Sbjct 1711 TCAGGCTCCGGCAGTGCCTCCAGATAGCCACAAAAATCAAAGGTCGGGTCAGCGTCGCGC 1770 Query 4964 TTGATGTTCAGTGCCTCGTCTGAGTTCTGCTGGGACTGAAGCAGTGACCGGGCGAGCATC 5023 ||||| | ||||||||||| ||||||||||| ||||| ||||| | || || |||| Sbjct 1771 TTGATACTTAGTGCCTCGTCGGAGTTCTGCTGTGACTGGAGCAGGGCACGCGCTGTCATC 1830 Query 5024 GGGTCGCTGAACTTCTGCATCAGGTGACGCACGATGACCGCCAGCTCGCGGGTGATTTTG 5083 |||||||||||||||||||| || || ||||| || || |||||||| |||| ||||||| Sbjct 1831 GGGTCGCTGAACTTCTGCATTAGCTGGCGCACAATCACGGCCAGCTCACGGGCGATTTTG 1890 Query 5084 TCCTTAAGCTGCGGGTCGCGCTCCTGCGGGGCTATCTGTTCCGGGAAGTGAATAATCACC 5143 | ||| |||||||||||||| || | |||||| |||||||||||||| || | ||||||| Sbjct 1891 TTCTTGAGCTGCGGGTCGCGTTCATCCGGGGCAATCTGTTCCGGGAAATGCAGAATCACC 1950 Query 5144 CGTCGGCGTGACACGCCGCCGCTGCGGTCGGTGAAGCGCATCGGGTTATTGTTCACGGCC 5203 || || || || || ||||||||||||||||| || ||||||||||| |||||||||||| Sbjct 1951 CGGCGACGGGAAACACCGCCGCTGCGGTCGGTAAATCGCATCGGGTTGTTGTTCACGGCC 2010 Query 5204 AGAATCACCGCCGGGATGTGCGTGGAGTACGCATCCCGGTATTTCGGGTCAACGGACACC 5263 ||||||||||||||||| || |||||||| |||||| |||||||||||| || || ||| Sbjct 2011 AGAATCACCGCCGGGATATGGGTGGAGTAAGCATCCTTGTATTTCGGGTCGACCGAGACC 2070 Query 5264 GCATCGCCGCCGGTGATGGCCTTGAGTCCGGCACCGTCGCCGCTCCATTTTTCCTGGTCC 5323 ||||| ||||||||||||||||||||||| || ||||| ||||||||||| |||||||| Sbjct 2071 GCATCACCGCCGGTGATGGCCTTGAGTCCTGCCCCGTCACCGCTCCATTTCTCCTGGTCA 2130 Query 5324 GGCAGGCGTATCAGTGAGAAGCCAGTTAACGCGGCACGTTCACGCGGGGATTCCAGCGTC 5383 ||||| || || || ||||||||| | ||||| |||||||||||||| || |||||||| Sbjct 2131 GGCAGACGGATGAGCGAGAAGCCAATCAACGCAGCACGTTCACGCGGCGACTCCAGCGTT 2190 Query 5384 TCGATGGTGGCCGACGTGGCGTTATCCTCCCCGGCCAGCAGGGTGGCTATTTCGGCCATG 5443 |||||||| ||||||||||||||||| |||||||| |||| ||| || |||||||||| Sbjct 2191 TCGATGGTAGCCGACGTGGCGTTATCTTCCCCGGCAAGCATGGTCGCAATTTCGGCCAGA 2250 Query 5444 ATACTTTTGCCGCTGCCGCCGGGACCGGTCACCTCCAGAAAGAGCTGCCAGTCGTAGCGG 5503 |||||||| |||||||| || || |||||||| || |||||||||||||||||||| ||| Sbjct 2251 ATACTTTTACCGCTGCCACCCGGCCCGGTCACTTCGAGAAAGAGCTGCCAGTCGTAACGG 2310 Query 5504 TTTGCCAGCACCATAAACAGTGCAGCCAGAATCACGTCGCGTTTTTCCGCACGGCCACCG 5563 || ||||||||||||||||| || ||||||||||||||||||||||||| | ||||||| Sbjct 2311 TTCGCCAGCACCATAAACAGCGCGGCCAGAATCACGTCGCGTTTTTCCGGTCTGCCACCG 2370 Query 5564 GCGGCACGGTCAAGCCAGCGCCAGAAGGCGGGGGCGTGGGTTTCCAGCGTTTCACCGTCC 5623 ||||| ||||| |||||||||||||| | || ||||| |||||||||||||| || ||| Sbjct 2371 GCGGCGCGGTCGAGCCAGCGCCAGAAATCCGGCGCGTGAGTTTCCAGCGTTTCGCCCTCC 2430 Query 5624 ACCGGCGGGGTGAAATCCACATCGCACAGGGTGCGCATCCAGTGTGACGGACTGTGCGGG 5683 ||||||||||| ||||| |||||||| || ||||||| |||||| || ||||||| Sbjct 2431 ACCGGCGGGGTAAAATCGACATCGCAAAGCGTGCGCAGCCAGTGCGATTTGTGGTGCGGG 2490 Query 5684 TGGAACGTGCCGTTCTGCGTGTCGAGCACGCCGTTACGAAAGCCAATCAGGCGGCGGGAG 5743 ||| |||||| | || || || |||||||||||||| |||||||| ||||| | Sbjct 2491 CTGAATGTGCCGGTGGCGGTATCAAGTACGCCGTTACGAAAACCAATCAGACGGCGCGCT 2550 Query 5744 GGGGCTTCCTGCTGCGGAATAATCAGCTTCAGGGTATCCACCACGGAGGCCACCTTCCCG 5803 || || |||||||||||||||||||| ||||| || |||||||| ||||| | ||||| Sbjct 2551 GGTGCGTCCTGCTGCGGAATAATCAGTTTCAGAGTCTCCACCACTGAGGCAATTTTCCCC 2610 Query 5804 GAGGAGAACGGCGCACGCAGACGCTGAAACAGCCCGGCCACATCCCGGGCAAAGTCCTGT 5863 || ||||| || ||||||||||||||||| | ||||||||| || ||||||||||| Sbjct 2611 GACGAGAATGGGGCACGCAGACGCTGAAATAACCCGGCCACGTCGCGGGCAAAGTCTGAC 2670 Query 5864 GGCGGCAGCACCTTCCAGACACCATTTTCATAGCGGGACAGAAGCTGGCCGTTGGCATCG 5923 || || | | ||||| | || |||||||||||||| ||||||||||| ||||| Sbjct 2671 GGTGGAATGATTTTCCATATCCCGGCCTCATAGCGGGACAGGAGCTGGCCGTTCGCATCC 2730 Query 5924 ACCGCGAGCGCCTCGCCGTAATGCTCATAGATACGCATGGCCTTTTCGCTGGTACTCATG 5983 || || ||||| |||||||||||||||| | ||||| |||||||| ||||| |||||| Sbjct 2731 ACGGCCAGCGCTTCGCCGTAATGCTCATGCACCCGCATTGCCTTTTCACTGGTGCTCATG 2790 Query 5984 GCGGAAAACTCCGCTTCGCTCATGGTGTCGAACGGGCTTTCAGCCGGTGGCCGGATGGCA 6043 |||| ||| ||||| ||||||||||| ||| ||||| |||||||||||||||||||| Sbjct 2791 GCGGTAAATTCCGCCTCGCTCATGGTAGTGAAAGGGCTGTCAGCCGGTGGCCGGATGGCG 2850 Query 6044 TCGTAAATGGCCTTACGGGTGGCCTCCCCGCCGTACTGCGTGAAGGCATCATTCCAGTCA 6103 || |||||||| || || | |||||| | || | ||| || || |||||||||||| Sbjct 2851 TCATAAATGGCTTTCCGCATCGCCTCCTCACCTTTCTGTTCAAATGCGTCATTCCAGTCA 2910 Query 6104 CCGAAGACCGGCGGCAGGGCAACAACACCTTCACACGCATCTGCGGCTGCGGCGGCTTTT 6163 ||||| ||||||||||||||||||| ||| ||||| || |||||||| || |||||||| Sbjct 2911 CCGAACACCGGCGGCAGGGCAACAATACCGTCACAGGCTTCTGCGGCCGCTGCGGCTTTG 2970 Query 6164 TTCTGGCCGTCACCACTGAGGTCACGGTCAGCGGCAAGGACAATCTGACAGGCGGGGTGC 6223 |||||||||| || | ||||| ||||| ||||| ||||||||||||||||| |||| Sbjct 2971 GTCTGGCCGTCGCCGTTAAGGTCGCGGTCGGCGGCGAGGACAATCTGACAGGCCGGGTAT 3030 Query 6224 TTCTGCCGGGCAAGGCTGGCCAGAGAAAGGAGGTTCACGGAAGAAAGCGCCACCATCACC 6283 ||||| ||||||||||| ||||||||||||||||| |||| || || |||||||| || Sbjct 3031 TTCTGACGGGCAAGGCTCGCCAGAGAAAGGAGGTTTGCGGACGACAGTGCCACCATGACG 3090 Query 6284 GTTTCACCGGTCAGGTGATGTACGGTAAGTGCGGTCGCGTATCCCTCCGCTATCCACAGA 6343 ||||| |||||||||||||||||||| || |||||||| || ||||||||||||||||| Sbjct 3091 GTTTCCCCGGTCAGGTGATGTACGGTGAGCGCGGTCGCATAGCCCTCCGCTATCCACAGC 3150 Query 6344 CGTTTTCCGGCCTGATTCTGTCCTTCAAGGGTGTGACAGGTGCCCCTGACCTGTCCGCCT 6403 |||||||| ||||| || | ||||| | |||||| | | || | ||| |||||| Sbjct 3151 CGTTTTCCCGCCTGTTTTTTCCCTTCGATGGTGTGGCTCGCTCCTTTTACCGCCCCGCCT 3210 Query 6404 TTCAGGGTGCGCTTACGGCCGTCAGCACTGATTAACTGAAGGTTAACCAGTTCGCCGCTG 6463 ||||||||||| || | || |||| | |||| | |||||||||||||||| | || | Sbjct 3211 TTCAGGGTGCGTTTGAGACCCTCAGAATTGATGAGCTGAAGGTTAACCAGTGCATCGGTA 3270 Query 6464 TCGTCATACAGTGGCACCACAAGGTCACCGGCGCGCCAGCTCACGCCACCGGCTCTGTGT 6523 | ||||||||| || || || | ||||||||||| | ||||||| |||| | | || Sbjct 3271 TTGTCATACAGCGGGACAACCACATCACCGGCGCGGAACGTCACGCCGCCGGTTTTATGC 3330 Query 6524 GTGCCGGTCAGCATCCGGCATTCCCGGCCGGGAAAGCCCTTGCGGGTCAGGTAGGCGTTA 6583 | | || ||| || | |||||| | |||| |||||||||||||||||||||||||| Sbjct 3331 ACGGCCGTGAGCGTCAGACATTCCAGAGCGGGGAAGCCCTTGCGGGTCAGGTAGGCGTTG 3390 Query 6584 CCGGTTCCGGTACGGGTTTTCGCCATCAGGGTTTGTGCCAGTGCGGCGGCGTTCTTCCGG 6643 ||| | | || ||||||||| ||||||| | ||||| ||||| || || ||| Sbjct 3391 CCGCTGGCCGTGCGGGTTTTCTCCATCAGTCTGACGGCCAGCGCGGCCGCCGCTTTACGG 3450 Query 6644 GCAGCGTCTGTTTCATCAACGGCGGCGGTCGTCACTGCCGGGTCAGCCGGTGGCAGGCTG 6703 | || || |||||| | | ||||| |||| ||||| || |||| | |||| | Sbjct 3451 TCTGCTTCGGTTTCAGCCTCTGCGGCCACAATCACCTCCGGGGCAACCGGCGACAGGTTA 3510 Query 6704 CCGGTCACGGCAGCCACCTTTGCGGCCGCGTCGGACGGGGAAACACCAAAAACCTTTTCA 6763 |||| ||| || ||||||| ||| || || ||||| ||| || || ||||||||| Sbjct 3511 CCGGCGACGACATTCACCTTTTGGGCTGCCTCTGACGGATTAACGCCGAACACCTTTTCA 3570 Query 6764 ACCAGTTTCAGGCCGTCACCGGCACCACACTGATTGCAGTACCAGGTGCCGCGCCCCTCC 6823 |||||||||||||| || || || || ||||| || ||| |||| || ||||||||||| Sbjct 3571 ACCAGTTTCAGGCCATCCCCTGCGCCGCACTGGTTACAGAACCACGTCCCGCGCCCCTCT 3630 Query 6824 CTGTCATCAAAACGGAAGCGGTCACTCCCGCCACAGACCGGACAGGGCTGATGACGGTTC 6883 | || ||||| ||||| |||||| ||||| || ||||| |||| |||||| ||||| Sbjct 3631 TTATCGTCAAAGCGGAAACGGTCAGAACCGCCGCACACCGGGCAGGCCTGATGCCGGTTT 3690 Query 6884 TTCAGCACCTGAATCCCCAGCGCCGGGAGAATACGCGGCCAGTGGCCGAGCGCATGGCTG 6943 || | ||||| | ||||||||||| |||||||||| |||||||||| ||||| | Sbjct 3691 TTAATCACCTTCACACCCAGCGCCGGCAGAATACGCGACCAGTGGCCGCAGGCATGTTTT 3750 Query 6944 ACGGTGGCGGTTACGTTCATTTTCATGGTGTTGTTCTCCTTCAGTGCAGTACCGGCGCTT 7003 || || | |||||||||||||||||||| | |||||| ||||||||||||||| || Sbjct 3751 ACCGTTTCCGTTACGTTCATTTTCATGGTTATTTTCTCCCTCAGTGCAGTACCGGTGCGG 3810 Query 7004 TTATGTGACGGGCACAGAGTTCATCCATCACAACCAGCCCGAGAAAGGACAGCGACGGCG 7063 | || |||||| | || || ||||||||||| ||||||||||||||||||| ||||||| Sbjct 3811 TGATATGACGGACGCAAAGCTCATCCATCACGGCCAGCCCGAGAAAGGACAGTGACGGCG 3870 Query 7064 CGGCCTTCAGGGGGCCGGATTCCATTAAATCTTCCAGCAGGGCACAGGCTATCTGACGCC 7123 |||| || || || |||| ||||||||||||||||||||| |||||||| ||||| || | Sbjct 3871 CGGCTTTGAGTGGTCCGGCTTCCATTAAATCTTCCAGCAGTGCACAGGCAATCTGGCGGC 3930 Query 7124 CTTTTTCCTCACCGTGCTGGCGCAGATAAAAGCCTTCCAGCTCAGCGGCGATGGCCGCCT 7183 |||||||||| |||||||||||||| || || || |||||||| ||||| || || | Sbjct 3931 CTTTTTCCTCGCCGTGCTGGCGCAGGTAGAATCCCTCCAGCTCGGCGGCAATAGCGCTTT 3990 Query 7184 CCAGTGACTCAAGGGTGAGATGCGGGTAGCGGTGCTGACGTTCGCACACGGTCAGCCAGG 7243 |||||| || |||||||| |||||||||||||||||||||||||||| ||||||||| | Sbjct 3991 CCAGTGTGTCGAGGGTGAGTTGCGGGTAGCGGTGCTGACGTTCGCACAGGGTCAGCCATG 4050 Query 7244 CACAGGCGACAGCGCGACGGTAAAGGGCAGCGCGTAAGACGGGCGGTAAGGGTGTTTTCA 7303 ||||||| || |||||||| || || || |||||||| ||||||||||| || |||||| Sbjct 4051 CACAGGCCACGGCGCGACGATACAGCGCGGCGCGTAATACGGGCGGTAATGGCTTTTTCA 4110 Query 7304 T 7304 | Sbjct 4111 T 4111 Score = 526 bits (582), Expect = 2e-145 Identities = 679/937 (72%), Gaps = 58/937 (6%) Strand=Plus/Plus Query 8180 CACCTCCACCACCGGCAGACGGGCAGCAAGGGAGAGCACATAGTCACGGACAAGGGAACG 8239 ||||||| | |||||||||||| |||||| ||||| || || ||||| || |||||| | Sbjct 4341 CACCTCCGCAACCGGCAGACGGCCAGCAAACGAGAGGACGTAATCACGAACGAGGGAAAG 4400 Query 8240 GCGGGCACTGCGTTCATCACCGGCGACGGTGCGAAGCATACAGATACGGGGATGACGGTC 8299 || || || | ||||||||||| |||||||| ||||||||||||||||| | |||||| Sbjct 4401 ACGTGCGGTGTGCTCATCACCGGCAACGGTGCGTAGCATACAGATACGGGGTTTACGGTC 4460 Query 8300 TGCGCGACGGACAGCCGCAAACACAAAGACAAATTCAGGGTGTGAGGGGGTAAGGGTTGT 8359 ||||||||| || || ||||||||||||||||| | |||||||| ||||| ||||| || Sbjct 4461 TGCGCGACGAACGGCGGCAAACACAAAGACAAACTGCGGGTGTGACGGGGTGAGGGTCGT 4520 Query 8360 AGCCATGATGGCAGCCTCCTGTGAA-TAGCAAATAACGCTATCGCCGGAGTTCTCACGCT 8418 |||||| |||| |||||| |||| |||| || || | | ||||||||| ||||| Sbjct 4521 AGCCATAGGGGCAACCTCCT-TGAAGTAGCGGTTATTGCCACCACCGGAGTTCCTACGCT 4579 Query 8419 CGATGGCGATAGCCCAGACGGGGGTGAGAATACCGG-CTTCACAGGATACCGGCCAGCCC 8477 | || | | ||| |||||||| ||||||||| ||||| |||| |||||||||||| Sbjct 4580 CATGGGTGGTGACCCGAACGGGGGTAGGAATACCGGCCTTCA-AGGAAACCGGCCAGCCC 4638 Query 8478 GGAGGCTGCCCCGCCTGAGCTACCATTGACTCTGCGGCATAATGAGCGGACGCGGGCAGG 8537 | ||||||||||||| | | |||||| | | ||| |||| Sbjct 4639 GAAGGCTGCCCCGCCCGGACCACCATT-----------------ATCTGACAGGGGC--- 4678 Query 8538 ATGCACGGAATGCCATCTGCACGACTGACCACACACCACACCATAATCTGGCGCTCTGTG 8597 | | || |||| |||| | || || ||| |||| Sbjct 4679 --------TAAGGTATAAGCAC---------CACAGC---CCGAAAAATGG----GTGTG 4714 Query 8598 GCATTGATTGCGAC-ACaaaaa--aaGACGCGTGGCGCGTCATATGTCGCCTGTGAA-TT 8653 | ||| || || ||| ||| ||||||| ||||||||| |||||||| |||| | Sbjct 4715 CC--TGA--GCAACGACATAAAAAAAGACGCATGGCGCGTCTGGTGTCGCCT-TGAAGTA 4769 Query 8654 GCTCGGGTTCTCACGCCCGGCTGCCGATTTTGCGGCAGGCGAAAAACTATATCCGCAAAT 8713 ||||||||| |||||||||||||||||||||| ||| | |||||||| | | ||| Sbjct 4770 ACTCGGGTTCCTACGCCCGGCTGCCGATTTTGCGACAGCGGGGAAACTATACCTGGAAAC 4829 Query 8714 GCCGGAAAAAGGCAAGCCAGAAAAAGGGAGTTTTTGCAGAGCGGGCATCATCATGCGTCG 8773 | || ||| | ||||||||||||||||| | ||||| || || |||||||||||||| Sbjct 4830 GGCGAAAAGAAGCAAGCCAGAAAAAGGGGCTGTTTGCTGAATGGTCATCATCATGCGTCA 4889 Query 8774 TACCCCCGTTTGCGTCCGGCAANNNNNNNNNNNNNNNNNNNNGTGACTTCAGAGTGCAGC 8833 || ||||| |||||| |||||| |||| |||||| ||| | Sbjct 4890 TAGCCCCGGTTGCGTTCGGCAATGCGGTCAGTCATCCATGCGGTGATTTCAGACTGCGCC 4949 Query 8834 CAGGCCACATTTTTACCGCCAAGACTCACCTGCGGCGGAAATTCCCCCTTACGGATGAGT 8893 || ||||| ||||| ||||| || || | || ||| || || | | |||||| Sbjct 4950 CACGCCACGTTTTTTCCGCCCAGGCTGATTTGTTTCGGGAAAGCCTCGCGGCTGATGAGG 5009 Query 8894 TCGTAGATGGTCGAGCGTGACAGGCCGCACAGGTGCATCACTTCCGGCACACGTAAAAAA 8953 ||||| ||||| || || |||||||||||||| ||||||||||| |||| || | ||| Sbjct 5010 TCGTAAATGGTTGACCGGGACAGGCCGCACAGATGCATCACTTCAGGCAGGCGGATAAAG 5069 Query 8954 CGCTCCTGCGTGATGTCCGGCAGCGGCATCAGTGGCGTCACTGGGGCGGGAGACGGGGAA 9013 |||||||| | || | || ||||||||| |||| | ||||| | |||||||||| Sbjct 5070 CGCTCCTGAACGGCATCAGACACCGGCATCAGCGGCGCGGCAGGGGCAGAAGACGGGGAA 5129 Query 9014 GAAAAAACAGCTTGCATCGGGCTACCTCGTTAATGTCCATACAGCACCGGATAAGTCCGT 9073 |||||| | | |||||||||||||||| || ||||||||| |||| |||||| Sbjct 5130 GAAAAAGCGGTGTGCATCGGGCTACCTC-ACAAAGTCCATACAATGCCGGTCGTGTCCGT 5188 Query 9074 CCGGCTTCGGGTAGCGCTTTATTTTGTGAATATTTTC 9110 ||||||||||||||| || |||||||||||||||||| Sbjct 5189 CCGGCTTCGGGTAGCTCTCTATTTTGTGAATATTTTC 5225 Score = 475 bits (526), Expect = 3e-130 Identities = 724/1020 (71%), Gaps = 21/1020 (2%) Strand=Plus/Plus Query 9310 GGTGAACAGTGGTGAACAGACGGTGAACAGTCATTACTGCGATTGTTCACCCTTTAACTT 9369 |||||||||| |||||||| ||||||||||| || | | | ||||||||||||| ||| Sbjct 5416 GGTGAACAGTAGTGAACAGTCGGTGAACAGTTATACCCTCAACTGTTCACCCTTTATCTT 5475 Query 9370 ACTGTATTACTTATCTTTTTTATTAAGGTGAACAGAGGTGAACAGTAAAATATaaaaaaa 9429 ||||||||||||||||||| || |||||||| ||||| ||| | | |||||||| Sbjct 5476 GCTGTATTACTTATCTTTTTCTTTTCAGTGAACAGTAGTGAATAGTTATAAGTAAAAAAA 5535 Query 9430 CAAACAGTAAGCCGGTTTTTCCTGCGACCTTTTCCTGGCTTGCCGG-TCTGAGGATGAGT 9488 ||||| || || | |||||||| ||||||| ||||| ||||| | | | | | || Sbjct 5536 CAAACGGTGAGTAAGATTTTCCTGAGACCTTTCTCTGGCAAGCCGGGTTTTAAGGTCTGT 5595 Query 9489 CTCCTGTGTCAGGGCTGGCACATCTGCAATGCGTCGTGTTGTTGT--CCGGTGTACGTCA 9546 | |||||| || |||| | ||||| |||||||||||| | || | || || Sbjct 5596 TT---GTGTCATTTTTGCCACAACGCCAATGAATCGTGTTGTTGTGTCTGGCG--CGGCA 5650 Query 9547 CAATTTTCTTAACCTGAAGTGACGAGGAGCCGGAAAATGTCT--GACCACACT-ATCCCT 9603 ||| | || | |||| || |||||| | | ||| || |||| | | || || Sbjct 5651 GAATCTCCTCAGATTGAAACGAAGAGGAGACCCGACATGACTCAGACCGCTGTTATTCCC 5710 Query 9604 GAATATCTGCAACCCGCACTGGCACAACTGGAAAAGGCCAGAGCCGCCCATCTTGAGAAC 9663 || || || |||| ||| ||| || || || | ||| | | || ||||| | || Sbjct 5711 GACTACCTTAAACCTGCAATGGAACGCCTTGAGACTGCCCGCTCGGCGCATCTCGCCAAT 5770 Query 9664 GCCCGCCTGATGGATGAGACCGTCACGGCCATTGAACGGGCAGA-GCA---GGaaaaaaa 9719 ||| ||| |||||||||||| |||||||| | | ||| ||| | ||||||| Sbjct 5771 GCCAGCCGTATGGATGAGACCACGACGGCCAT----CAGCCAGGTGCAAATGCAAAAAAA 5826 Query 9720 TGCGCTGGCGCAGGCCGACGGAAACGACGCTGACGACTGGCGCACGGCCTTTCGTGCAGC 9779 || |||| ||||| |||| || || | | || ||||| | ||||||||||| | Sbjct 5827 TGAACTGGAGCAGGAAAACGGCAATGATTCCGGCGCATGGCGTAGCGCCTTTCGTGCCGG 5886 Query 9780 CGGTGGTGTCCTGAGCGACGAGCTGAAACAGCGCCACATTGAGCGCGTGGCACGCCGGGA 9839 |||| |||| | | |||||||||||||| ||||| | | |||||||||||| ||||| Sbjct 5887 TGGTGCTGTCATTACTGACGAGCTGAAACAACGCCATCTGGCGCGCGTGGCACGGCGGGA 5946 Query 9840 GCTGGTACAGGAATATGACAATCTGGCCGTGGTGCTGAATTTCGAACGTGAACGCCTGAA 9899 |||| ||||||| ||||||| |||| | ||| ||| ||| || | || |||| || Sbjct 5947 ACTGGCGCAGGAATGTGACAATATGGCTGAGGTTCTGTCTTTTGAGCTGGACAGCCTTAA 6006 Query 9900 AGGGGCGTGTGACAGCACGGCCACCGCCTACCGGAAGGCACATCATCACCTTCTGAGTCT 9959 ||| ||||||||| | ||||||| || || || |||||||||| | | || || | Sbjct 6007 AGGAGCGTGTGACCGGACGGCCAGAGCGTATCGTCAGGCACATCACATCGTCCTCAGCCA 6066 Query 9960 GTATGCAGAGCATGAGCTGGAACACGCCCTGAATGAAACCTGTGAGGCGCTTGTCCGGGC 10019 |||||||||||||||||| || |||||| ||| |||||| ||||| ||| |||| Sbjct 6067 GTATGCAGAGCATGAGCTTGATGTTGCCCTGCGTGACACCTGTAGCGCGCTGGTCAGGGC 6126 Query 10020 AATGCATCTGAGCATTCTGGTACAGGAAAATCCGCTCGCCAACACCACCGGCCATCAGGG 10079 |||| | || | ||| ||||| | | | || ||||| ||||| |||||||| |||||||| Sbjct 6127 AATGAAACTCAACATACTGGTTCTGAATAACCCGCTAGCCAATACCACCGGGCATCAGGG 6186 Query 10080 CTACGTCGCACCGGAAAAGGCTGTCATGCAGCAGGTGAAATCATCGCTGGAACAGAAAAT 10139 ||| || || ||| |||| || ||||||||||||||| ||| || ||| | Sbjct 6187 CTATATCCAGCCAGAACAGGCCGTTATGCAGCAGGTGAAAGACCGGCTTGAGCAGGCGGT 6246 Query 10140 TAAACAGATGC-AAATCAGCCTCACCGGCGAGCCGGTTCTCCGGCTGACCGGACTGTCAG 10198 ||| | ||| | ||| | || |||| || ||||| || || |||||||| | Sbjct 6247 GAAA-GGCTGCGATATCCGTCTGACCGATGAACCGGTGCTGTTTAAAACAGGACTGTCGG 6305 Query 10199 CGGCAACACTCCCGCACATGGATTATGAGGTGGCAGGCACACCGGCACAGCGCAAGGTGT 10258 | | || || ||||| ||||| |||| || || | ||| || | ||||| || || | Sbjct 6306 CCTCCACGCTGCCGCATATGGAGCATGACGTTGCGGCCACGCCCGTTCAGCGGAAAGTCT 6365 Query 10259 GGCAGGACAAAATAGACCAGCAGGGAGCAGAGCTTAAGGCCAGAGGGCTGCTGTCATGAT 10318 ||||||| ||||| | | | ||| || || || || | ||||| |||||||||| Sbjct 6366 GGCAGGAAAAAATGCGGGAACGTGAAGCTGACCTGAAAGCACGGGGGCTACTGTCATGAT 6425 Score = 349 bits (386), Expect = 3e-92 Identities = 525/735 (71%), Gaps = 21/735 (3%) Strand=Plus/Plus Query 10901 CCTTACAGCAGGCCTTTGACACCTGTCAGAATAACAAAGCAGCATGGCTGCAACGCAAAA 10960 ||||||||||||||| |||| ||||||||| |||||| | || |||||| | || ||| Sbjct 6696 CCTTACAGCAGGCCTATGACGCCTGTCAGACGAACAAAACCGCGTGGCTGAACCGTAAAG 6755 Query 10961 ATGAGCTGGCAGCGGCCGAACAGGAATATCTGCGGCTTCTGTCAGGAGAAGGCAGAAACG 11020 || ||| | || || || |||||||||| | | || | | ||| | || | | Sbjct 6756 CCGAACTGACCGCCGCAGAGCAGGAATATCAG-GAATTATTGCTGGATGA--CA-ATGCA 6811 Query 11021 TCAGTCGCCTG--GACGAATTACGCA-----ATATTATCGAAGTCAGAAAATGGCAGGTG 11073 |||| | || | || | |||| | | || || |||| ||||||| |||| Sbjct 6812 TCAGGCTCCCGCAGATTACAGACGCTGCGTGACCTGATTGACGTCAAAAAATGGGAGGTC 6871 Query 11074 AATCAGGCCGCCGGTCGTTATATTCGTTCGCATGAAGCCGTTCAGCACATCAGCATCCGC 11133 ||||||||||||||||| || || |||||||| | || |||| |||||||||||| Sbjct 6872 AATCAGGCCGCCGGTCGCTACATCTTCTCGCATGAGGAGGTGCAGCGCATCAGCATCCGT 6931 Query 11134 GACCGGCTGAATGATTTTATGCAGCAGCACGGCACAGCACTGGCGGCCGCACTGGCACCG 11193 |||||||| |||||||||||||||| ||||| ||| ||| | ||||||||||||||| Sbjct 6932 AACCGGCTGCGTGATTTTATGCAGCAGAACGGCGCAGAGCTGACCGCCGCACTGGCACCG 6991 Query 11194 GAGCTGATGGGCTACAGTGAGCTGACGGCCATTGCCCGAAACTGTGCCATACAGCGTGCC 11253 ||||||||||| | | | | | || || ||| | || | | ||| | Sbjct 6992 GAGCTGATGGGGATTAAAAACCAGCCCGCGATGATAAAAAATCGCGCGCTTGACCGTTCA 7051 Query 11254 ACAGATGCCCTGCGTGAAGCCCTT-CTGTCCTGGCTTGCGAAGGGTGAAAAA---ATTAA 11309 | |||| | ||||| ||| | ||| ||||| || | || ||| ||||| Sbjct 7052 GTCTCTTTCCTGAGAGAAGCTCTTTCCGTC-TGGCT---GACCGCTGGAAATGACATTAA 7107 Query 11310 TTATTCCGCACAGGATAGCGACATTTTAACGACCATCGGATTCAGGCCTGACGTGGCTTC 11369 |||||| |||||||||| || ||||||||| ||||||||| |||||||||| | |||| Sbjct 7108 TTATTCTGCACAGGATAAAGATATTTTAACGGCCATCGGATACAGGCCTGACACGCCTTC 7167 Query 11370 GGTGGATGACAGCCGTGAAAAATTCACCCCTGCGCAGAACATGATTTTTTCGCGTAAAAG 11429 | |||||| | |||||||||||||||||||| ||||||||||||| | || | | Sbjct 7168 GCGGGATGATAATCGTGAAAAATTCACCCCTGCACAGAACATGATTTACACCCGACGACG 7227 Query 11430 TGCGCAACTGGCATCACGTCAGTCAGTGTAAAATTCCCCGAAAATCCGCCCGTTTTTACT 11489 || |||||| | | || | || |||| ||||| |||||| | |||||| Sbjct 7228 CGCCGGACTGGCCGCGCAGTAGCCTGTCAAAAAATCCCCATAAATCCCGCTATTTTTAAC 7287 Query 11490 GAAAAAAGCCATGCATCGATAAGGTGCATGGCTTTGCATGCGTTTTCCTGCCTCATTTTC 11549 ||| |||||||||||| ||||||||||||| |||||||||||||||| | | | | | | Sbjct 7288 CAAATAAGCCATGCATCCATAAGGTGCATGGTTTTGCATGCGTTTTCCCGAC-CCTGTAC 7346 Query 11550 TGCAAACC-GCGCCATTCCCGGCGCGGTCTGAGCGTGTCAGTGCAACTGCATTAAAACCG 11608 | | || |||||| || |||||||| |||| | | ||| ||||||||||| || Sbjct 7347 TCCCTGCCAGCGCCAGTCGCGGCGCGGCCTGAATCTACCTTTGCTCCTGCATTAAAAGCG 7406 Query 11609 CCCCGCAAAGCGGGC 11623 ||| |||||||| Sbjct 7407 GCCCCTTAAGCGGGC 7421 >seq2164 Length=1578 Score = 120 bits (132), Expect = 2e-23 Identities = 192/273 (70%), Gaps = 11/273 (4%) Strand=Plus/Minus Query 3687 AAGCTTTTTA---GCTTCATCGCGTTTTGCTCTTGCCTGAGCAAGCGTCACAGTAGGCCA 3743 ||||||||| || || || || ||| || || || ||||| | ||| | || | Sbjct 642 AAGCTTTTTCTTGGCGTCGTCACGCAGTGCCCTCGCTTGTGCAAGGGACACTGCCGGATA 583 Query 3744 AACACCAAACGCAAGACGATCCTCTTTTTTGTCAGAGGGACGTCTGTATTTCATGCGCCA 3803 |||||||| || | ||| | ||||||| | || || |||||||| ||||| Sbjct 582 GACACCAAAGGCCATACGCTTCTCTTTTCCATTGAAGCGA------TATTTCATCCGCCA 529 Query 3804 GTATTTGGAACCTTTGGCCGAAACCTCAAGATACAAACCACCACCATCGGCCATTTTGTA 3863 |||| ||||||| || ||||||||||||||||||| ||||||| |||| || || Sbjct 528 GTATCTGGAACCAGAGGGAACAACCTCAAGATACAAACCAGCACCATCTGCCAGCTTATA 469 Query 3864 GGTTTTGTCTTTTGGCTTTGCGGTCTCGACCTGTCTGGCGTTGAGCTTCATTTGGGGGCA 3923 || ||| ||| | || || || | || ||||||| || || || |||| ||||||||| Sbjct 468 GGCTTTCTCTCTGGGTTTAGCTGCGTCTACCTGTCGCGCATTAAGTTTCA-TTGGGGGCA 410 Query 3924 CATTTCTA-ATCGAAGTTAAGATGCCCCCAATT 3955 | ||| | |||| || ||||||||| || Sbjct 409 TCTCCCTAGACCGAACACAAAATGCCCCCACTT 377 >seq122 Length=28749 Score = 113 bits (124), Expect = 3e-21 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 8390 AATAACGCTATCGCCGGAGTTCTCACGCTCGATGGCGATAGCCCAGACGGGGGTGAGAAT 8449 || ||||||||| ||| ||||| |||||| ||| |||||||||||||||||| |||| Sbjct 14826 AAAAACGCTATCACCG-AGTTCCTACGCTCATTGGTGATAGCCCAGACGGGGGTAGGAAT 14884 Query 8450 ACCGGCTTCACAGGATACCGGCCAGCCCGGAGGCTGCCCCGCCTGAGCTACCATTGA 8506 |||||| ||| ||| ||||||||| | | ||||||||||||||||||||| || Sbjct 14885 ACCGGCGTCATCGGAAACCGGCCAGGCTAATGCCTGCCCCGCCTGAGCTACCATAGA 14941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37075757562160