Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_001895.1 Length=33593 Score E Sequences producing significant alignments: (Bits) Value seq367 93.3 9e-15 >seq367 Length=135625 Score = 93.3 bits (102), Expect = 9e-15 Identities = 285/432 (66%), Gaps = 13/432 (3%) Strand=Plus/Plus Query 334 CCCGACGTTCTCCGGCTTGCCACCCATCAACTGAAAGGGGATGCGGTGCGCGTCCAGCAG 393 |||| |||||| |||| | ||||||||||| || ||||| ||| | ||||| Sbjct 45066 CCCG-CGTTCTGCGGCACGATGCCCATCAACTGCGGTGGAATGCGCAACGCCGCGAGCAG 45124 Query 394 GTCAGCGGCGCTGGCTTTTTTGATATTaaaaaaaTCGTCCTTCGTCGCCACTTCACTGAG 453 || | |||| |||||||| || |||||||| | ||| || || || | Sbjct 45125 ATCGTCACGGCTGATGTTTTTGATCGAGCTGAATTCGTCCTTGGCCGCAACCTCGCTCAC 45184 Query 454 GGGGATAATTTTAATGCCGTCGGCTTTC--CCCTG-TGGGGCATAGAGAAACAGGTTTTT 510 ||||| | | |||||||| ||||| |||| || || || | ||||||||| Sbjct 45185 CGGGATGAGCTGAATGCCGT---CTTTCTTGCCTGCCGGCGCGTACACAAACAGGTTGCG 45241 Query 511 AAAGTTGTTGCGGCCTTTCGACTTGACCA-TGTTTTCGCGAAGCATTTCGATATCGTTGC 569 ||||||| | |||||||| || || || | ||| || ||||| || | Sbjct 45242 AAAGTTGCCTGGCCCTTTCGAGTTCTTCAGTGCGGT-GCGCAGTGAGTCGATGTCCTCTT 45300 Query 570 GATCCTGCACGGCATCGGTGACATACATGATGTATCCGGCATGTGCGCCATTTTCGTAAT 629 | |||| | || ||||| | |||| ||| | |||||||| ||| || | ||| | Sbjct 45301 CCTTCTGCGCCGCGTCGGTCATGTACAGAATGAAACCGGCATGGCTGCCGTTGTTGTAGT 45360 Query 630 ACTTGCGGCGGAACAACGTGGCCGACTCATTCAGCCAGGCAGAGTTAAGGGCGCTG--AG 687 ||||||| ||||||| |||||| ||| || ||| || || |||||| || Sbjct 45361 ACTTGCGCCGGAACAGCGTGGCGCTCTCGTTGAGCAGTGC--GCTTTGCAGCGCTGCCAG 45418 Query 688 ATATTCCGGCAGGCCGTACAGCTCCTGATTAATATCCGGCTCCAGCAGGTGAAACACGGA 747 | |||||||||||||| | ||||| || ||||| | ||| ||| ||| | | || Sbjct 45419 CCACTCCGGCAGGCCGTAGATTTCCTGGTTGATATCGGCCTCGCGCAAGTGGCAGATCGA 45478 Query 748 GCCGGGCGCGAA 759 ||||| || || Sbjct 45479 ACCGGGGGCAAA 45490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107358142364550