Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq48 95.1 8e-15 >seq48 Length=44992 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | |||| || || || ||||| |||||||| || ||| |||| Sbjct 22387 AGTACCAAGTGAAGAGTAGACTCCTTTTGAATGTTATAGTCGGATAGAGTGCGGCCGTCC 22328 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||| || || || ||||| || ||||| ||| || | || ||||||||| Sbjct 22327 TCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGTGGAATGCCCTCCTTGTCT 22268 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||||| || | | || | ||| | ||||| |||| |||||||| Sbjct 22267 TGAATCTTGGTCTTTACATTGTCGATGGTATCAGATCCCTCGACCTCCAGTGTGATGGTC 22208 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || | || || |||||||||||||| Sbjct 22207 TTTCCAGTCAATGTCTTGACAAAGATCTGCAT 22176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323016856152800