Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq1341 100 3e-17 >seq1341 Length=46086 Score = 100 bits (110), Expect = 3e-17 Identities = 119/158 (75%), Gaps = 5/158 (3%) Strand=Plus/Plus Query 14518 TTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTT 14577 ||||||||| || ||||| || ||||| || | ||||| |||||||| |||||| Sbjct 39332 TTATGGCAACAGGTACAGTTAAGTGGTTCAATGATTCCAAAGGTTTTGGCTTCATCACTC 39391 Query 14578 CAGAAGAAGGCA---AAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGAT-GGATTC 14633 |||| || ||| |||||||||| ||||| ||||| |||||| || ||| || ||| Sbjct 39392 CAGATGATGGCGGCGAAGATTTGTTTGCTCATTTCTCCGCAATC-AACATGAACGGTTTC 39450 Query 14634 AAATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGT 14671 || | || | ||||||||||||||| |||| || || Sbjct 39451 AAGACCCTCAAAGAAGGTCAAAAAGTTCAATTCGAAGT 39488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48446553642730