Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_004680.1 Length=59471 Score E Sequences producing significant alignments: (Bits) Value seq3133 91.5 6e-14 >seq3133 Length=4061 Score = 91.5 bits (100), Expect = 6e-14 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 42924 TGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGGAGGAAACGCGAAACCCGCA 42983 ||| | ||| ||||||||| |||||| || |||||||||||| ||| ||| Sbjct 1528 TGCGCGCAGACCGATCCCGAAGCGTTCTTTCCTGAAAAGGGAGGATCGACGAGGGAAGCA 1469 Query 42984 AAGCGGATCTGCGGTATTTGCGACGTCCGGGACGAATGCCTTCAGTGGGCGCTGGACAAC 43043 || ||||||||| ||| || || || ||||| ||||| ||| ||||| | ||| Sbjct 1468 AAACGGATCTGCCTCGGTTGTGAAGTTCGTGACGAGTGCCTCGAGTACGCGCTCGCGAAC 1409 Query 43044 AACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCGTGAACGCCGACCACT 43096 |||||| |||||| |||| || || |||||||||| || || || | ||| Sbjct 1408 GACGAACGGTTCGGAATCTGGGGAGGGTTGTCCGAGCGCGAGCGTCGGCGACT 1356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190153970351730