Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq215 84.2 8e-12 >seq215 Length=48791 Score = 84.2 bits (92), Expect = 8e-12 Identities = 159/225 (71%), Gaps = 12/225 (5%) Strand=Plus/Plus Query 18620 TGTACGGGATCGATCTGAAATGGGCGTTTCCGGGTGACGGATCCGCTGGCGACACGCAGC 18679 ||| ||| |||| | |||| |||| |||||| || || ||| | || || |||| Sbjct 33217 TGTTCGGCATCGGTTTGAAGTGGG-GTTTCCC--TGCTGG---CGCCGAAGATACCCAGC 33270 Query 18680 GAACGGAGATCTGGTACAGCCGCACGCCGAATCGCGACGACGCGACCAAGTTCTCCGACT 18739 | |||||| ||||||||| || ||| || | || || |||||| ||| | | || | Sbjct 33271 GGACGGAGCTCTGGTACAACCCGACGAACAACCTCGGCGCCGCGACGAAGCTGGCGGATT 33330 Query 18740 TCGCGTATCCGCAGGC-GTCGACGTCGTAT-CAGGGGCTCGCGGTCGGGCAGGT-GTTTT 18796 | || || |||||||| | | || || || ||| ||| || | ||||| | ||| | Sbjct 33331 TGGCATACCCGCAGGCTGACTAC--CGCATGCAGTCGCT-GCTGGCGGGCGCGCAGTTCT 33387 Query 18797 ATTTCTGGGCGCGCCTGGTCGACACGTCCGGCAACGTCGGGCCGT 18841 ||||||||||||||||| ||| |||||||| |||| |||| Sbjct 33388 TCTTCTGGGCGCGCCTGGTGGACCGCACCGGCAACATCGGTCCGT 33432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175417221618870