Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq593 138 1e-27 seq48 107 2e-18 seq420 102 7e-17 seq1623 89.7 4e-13 seq2393 86.0 5e-12 >seq593 Length=58250 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| || | ||||| || | ||||| | |||||||||| Sbjct 29377 ATGCAAATATTTGTAAAGACCCTCACTGGCAAGACTATTACTTTGGAAGTCGAGGGATCT 29436 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| ||||| ||||| || || ||||||||| Sbjct 29437 GACACCATCGACAATGTTAAGACCAAGATTCAAGACAAGGAAGGAATTCCACCCGATCAA 29496 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||||| |||| || ||| ||||||||||| |||| | | | | || ||| || ||| Sbjct 29497 CAAAGACTCATTTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTCTCCGACTACAAC 29556 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| |||||||| | ||||| || Sbjct 29557 ATTCAAAAGGAATCTACTCTCCATTTGGT 29585 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| || || |||||||| | || ||| | ||||| |||| Sbjct 29149 ATGCAAATCTTTGTAAAGACCTTGACTGGAAAGACCATCACCCTGGAAGTTGAGGGATCT 29208 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||| ||||| || || ||||||||| Sbjct 29209 GACACCATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGAATCCCACCCGATCAA 29268 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | ||| ||||||||||| |||| | | | | || || || ||| Sbjct 29269 CAACGTCTCATCTTTGCCGGAAAGCAACTCGAGGATGGCCGCACCCTCTCTGACTACAAC 29328 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| |||||||| |||| || || Sbjct 29329 ATTCAAAAGGAATCTACTCTTCACTTGGT 29357 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| || | ||||| || | || ||| | || || |||| Sbjct 28921 ATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACCATCACCTTGGAGGTTGAGGGATCT 28980 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| ||||| ||||| || || ||||||||| Sbjct 28981 GACACCATCGATAACGTAAAGACCAAGATCCAAGACAAGGAAGGAATTCCACCCGATCAA 29040 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | ||| ||||||||||| |||| | | | | || || || ||| Sbjct 29041 CAACGTCTCATCTTTGCCGGAAAGCAACTCGAGGATGGCCGCACCCTCTCTGACTACAAC 29100 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || ||||| ||||||| || Sbjct 29101 ATTCAAAAGGAGTCTACTCTTCATTTGGT 29129 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| || | ||||| || | |||||| | || ||||||| | Sbjct 29605 ATGCAAATCTTTGTAAAGACTCTTACTGGCAAGACTATTACCTTGGAGGTCGAGGGCTCT 29664 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || || || || ||||||||| Sbjct 29665 GACACCATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATCCCACCCGATCAA 29724 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | ||| ||||||||||| |||| | | | ||| || ||| Sbjct 29725 CAACGTCTCATCTTTGCCGGAAAGCAACTCGAGGATGGTCGTACTCTTTCCGACTACAAC 29784 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || || || | ||||| || Sbjct 29785 ATTCAAAAGGAGTCAACCCTCCATTTGGT 29813 >seq48 Length=44992 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| | |||||||||| | Sbjct 22404 ATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATCACCTTGGAAGTCGAGGGCTCA 22463 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || || ||||||||| Sbjct 22464 GACACCATCGATAATGTCAAGACCAAGATCCAAGACAAGGAAGGAATCCCACCCGATCAA 22523 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||||| || | | ||||||||| ||||| |||| | | | ||| || ||| Sbjct 22524 CAAAGACTCATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACATTGTCCGACTACAAC 22583 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || ||||| ||||||| || Sbjct 22584 ATTCAAAAGGAGTCTACTCTTCATTTGGT 22612 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||| ||||| ||||| || | || || | || ||||||| Sbjct 21948 ATGCAAATTTTCGTAAAGACATTGACTGGCAAGACCATCACACTTGAGGTCGAGGGATCT 22007 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || |||||||| | ||||| ||||| ||||| ||||| || || ||||||||| Sbjct 22008 GATACCATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGAATCCCACCCGATCAA 22067 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || |||||||||||||| |||| | | | | ||| || ||| Sbjct 22068 CAACGTCTCATTTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTATCCGACTACAAC 22127 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| || ||||| |||| || || Sbjct 22128 ATACAAAAGGAGTCTACTCTTCACTTGGT 22156 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || ||||| || | ||||| || | ||||| | || || |||| Sbjct 22631 AATGCAGATTTTCGTAAAGACTCTCACTGGCAAGACTATTACTTTGGAGGTTGAGGGATC 22690 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || |||||||| | ||||| |||||| ||||| ||||| || || |||||||| Sbjct 22691 TGATACCATCGACAACGTCAAGACCAAGATTCAAGACAAGGAAGGAATCCCACCCGATCA 22750 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || |||| || |||||||| ||||| |||| | | | | || || || || Sbjct 22751 ACAACGTCTCATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCTGACTACAA 22810 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||| || ||||| |||| || || Sbjct 22811 CATTCAAAAGGAGTCTACTCTTCACTTGGT 22840 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || ||||| |||||||| | || || | || ||||||| Sbjct 22175 AATGCAGATCTTTGTCAAGACATTGACTGGAAAGACCATCACACTGGAGGTCGAGGGATC 22234 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || |||||||| | || || |||||| ||||| || ||||| || |||||||| Sbjct 22235 TGATACCATCGACAATGTAAAGACCAAGATTCAAGACAAGGAGGGCATTCCACCCGATCA 22294 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | || || | | ||| ||||||||||| || | | | | | ||| ||||| Sbjct 22295 GCAACGTCTCATCTTTGCCGGAAAGCAACTCGAGGACGGCCGCACTCTATCCGACTATAA 22354 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||| || ||||| |||| || || Sbjct 22355 CATTCAAAAGGAGTCTACTCTTCACTTGGT 22384 >seq420 Length=40905 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 || || ||||||| | ||||| || ||||| ||||| || | || || | || ||||| Sbjct 14236 AATCATAATGCAAATCTTTGTCAAGACATTGACTGGCAAGACCATCACACTTGAGGTCGA 14177 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 || | ||||||||||| | ||||| ||||| ||||| ||||| || || || Sbjct 14176 GGGCTCAGACACCATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGAATCCCACC 14117 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163 ||||||||| ||||| || | | || |||||||| || || | | | | | ||| Sbjct 14116 CGATCAACAAAGACTCATCTTTGCTGGAAAGCAACTAGAGGACGGACGTACCCTTTCCGA 14057 Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||||||||| || || || |||| || || Sbjct 14056 CTACAACATTCAAAAGGAGTCCACTCTTCACTTGGT 14021 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || | |||||||| | |||||| | || || |||| Sbjct 13546 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATTACCTTGGAGGTTGAGGGATC 13487 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||| | ||||| ||||| ||||| ||||| || || ||||| || Sbjct 13486 AGACACCATCGACAATGTCAAGACCAAGATCCAAGACAAGGAAGGAATCCCACCCGACCA 13427 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || |||| || | | ||||||||||| || |||| | | | | || || || || Sbjct 13426 GCAACGACTAATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTCTCTGACTACAA 13367 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| |||||||| ||||| ||||||| || Sbjct 13366 CATACAAAAAGAGTCTACTCTTCATTTGGT 13337 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || | ||||| || | |||||| | || || |||| Sbjct 13774 AATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCTTGGAGGTTGAGGGATC 13715 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || |||||||| | ||||| |||||| || || || || || || |||||||| Sbjct 13714 TGATACCATCGACAACGTCAAGACCAAGATTCAAGATAAGGAGGGTATTCCACCCGATCA 13655 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || || | | ||||||||||||||| |||| | | | | || || || || Sbjct 13654 ACAACGCCTTATCTTTGCCGGCAAGCAACTCGAGGATGGCCGCACCCTCTCTGACTACAA 13595 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| |||||||| ||||| |||| || || Sbjct 13594 CATACAAAAAGAGTCTACTCTTCACTTGGT 13565 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || || |||||||| | || || | || ||||| | Sbjct 14002 AATGCAGATTTTCGTCAAGACTTTGACTGGAAAGACCATCACACTGGAGGTCGAAGGATC 13943 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||||| | || || ||||| ||||| ||||| || || |||||||| Sbjct 13942 AGACACCATCGACAATGTAAAGACCAAGATCCAAGACAAGGAAGGAATCCCACCCGATCA 13883 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || || | | ||||||||||||||| |||| | | | ||| || || Sbjct 13882 ACAACGTCTCATCTTTGCCGGCAAGCAACTCGAGGATGGTCGCACTCTATCCGACTACAA 13823 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||| || || || |||| || || Sbjct 13822 CATTCAAAAGGAGTCCACTCTTCACTTGGT 13793 >seq1623 Length=5066 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | ||||| || | || ||| | || || |||| | Sbjct 328 ATGCAAATCTTTGTTAAAACCCTGACTGGTAAGACCATCACCTTGGAGGTTGAGGGCTCT 269 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||||||| | || || ||||| ||||| ||||| || || ||||||||| Sbjct 268 GATACCATCGAGAACGTAAAGACCAAGATCCAAGACAAGGAAGGAATCCCCCCCGATCAA 209 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | ||| |||||||| || |||| | | | ||| || ||| Sbjct 208 CAACGTCTTATCTTTGCCGGAAAGCAACTTGAGGATGGTCGTACTCTTTCCGACTACAAC 149 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| || ||||| ||||||| || Sbjct 148 ATCCAAAAGGAGTCTACTCTTCATTTGGT 120 >seq2393 Length=1004 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 24085 ACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAG 24144 |||| ||||| || || ||||| ||||| ||||| |||| || ||| ||||||||||||| Sbjct 1004 ACAAGGAAGGAATCCCACCCGACCAACAAAGACTCATTTTCGCCGGAAAGCAACTCGAAG 945 Query 24145 ATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | | | | | ||| || ||||||||||| ||||| ||| ||||||| || Sbjct 944 ACGGTCGCACTCTTTCCGACTACAACATTCAAAAGGAATCCACACTTCATTTGGT 890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429862615970775