Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_008204.1 Length=67188 Score E Sequences producing significant alignments: (Bits) Value seq1130 113 2e-20 >seq1130 Length=54118 Score = 113 bits (124), Expect = 2e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 41669 TTCCTGGCGCAGGTCGGCCACGAGTCCGGCGGCCTGAAATACCAGGAGGAGATCGCCTCC 41728 |||||||| ||||| ||||||||||||||| ||||| || | ||| | || | Sbjct 52938 TTCCTGGCCCAGGTGGGCCACGAGTCCGGCAGCCTGGTGTATGTGCGCGAGCTGGCGAGC 52997 Query 41729 GGTGCGGCGTACGAAGGCCGGGCCGACCTCGGCAACACCCAGCGCGGCGACGGCGTGCGG 41788 || ||| |||||||| || |||||||| || || || ||||| |||||||||||||| Sbjct 52998 GGGCAGGCCTACGAAGGTCGCGCCGACCTGGGAAATACGCAGCGTGGCGACGGCGTGCGC 53057 Query 41789 TTCAAGGGACGCGACTTCATCCAGATCACCGGGCGGTCCAACTAC 41833 |||||||| || | | | | ||| | ||||| || |||||||| Sbjct 53058 TTCAAGGGCCGTGGCCTACTGCAGGTGACCGGCCGCGCCAACTAC 53102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 214840123551945