Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_008206.2 Length=78296 Score E Sequences producing significant alignments: (Bits) Value seq1862 111 8e-20 >seq1862 Length=5913 Score = 111 bits (122), Expect = 8e-20 Identities = 230/341 (67%), Gaps = 10/341 (3%) Strand=Plus/Plus Query 49005 ACTGTCGTCGGTAATCTGACCGCCGACCCCGAGCTGCGATTCACCCCGAGTGGCGCGGCT 49064 || ||| |||| || ||||| || || || || || || ||||||||| || || || Sbjct 5207 ACCGTCATCGGAAACCTGACGGCTGATCCTGAACTTCGTTTCACCCCGGCGGGTGCCGCG 5266 Query 49065 GTCGCAAACTTCACGGTCGTGTCCAATGACCGTTTCCTCAAGGATGGG------GAGTGG 49118 || |||||||||||||| | |||| |||| | || | | || ||| Sbjct 5267 GTTGCAAACTTCACGGTTGCTTCCACGCCCCGTACCTTCGACCGTAATTCCAATGAATGG 5326 Query 49119 CAGGATAAGGACCCCGTGTTCCTCCGCTGCAACGTGTGGCGTGAGTACGCTGAGAACGTC 49178 | || || | ||||| | || |||||| | ||||| || || ||||||||| Sbjct 5327 AAAGACGGCGATGCGCTGTTCATGCGTTGCAACATCTGGCGCGAAGCAGCCGAGAACGTC 5386 Query 49179 GCTGAGTCGCTGACACGCGG--CACCACCGTGATCGTCACCGGCAAGCTCTCGCAGCGGA 49236 || ||| |||| || || ||| | || ||||| | |||| |||| |||||| Sbjct 5387 GCGGAGAGCTTGACCCGTGGTTCACGA--GTAATCGTGAGCGGCCGGCTCAAGCAGCGTT 5444 Query 49237 ACTTCGAGGACCGCGAGGGGAACAAGCGCACCGTCGTGGAGCTGGAGGTCGATGAGATCG 49296 | ||| |||||||| | ||||| || ||||| ||||| || |||||||| |||| Sbjct 5445 CGTACGAAACTCGCGAGGGCGAAAAGCGAACTGTCGTCGAGCTCGAAGTCGATGAAATCG 5504 Query 49297 GACCCGCTCTGCGTTTCGCCACGGCGAAGGTGAGCAAGGCC 49337 | || | ||| | ||||||||| ||||| | ||||||| Sbjct 5505 GTCCTTCACTGAAGTACGCCACGGCAAAGGTCAACAAGGCC 5545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 250379656417885