Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq1152 123 8e-24 >seq1152 Length=9820 Score = 123 bits (136), Expect = 8e-24 Identities = 185/263 (70%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 29405 CAGCGCATCCGCGATCTGGTTCGTCAGGCGCTCTTGAACTTGCAGGCGCTTGGCGAAAAT 29464 ||| |||| |||||||| |||||| ||| || || |||||||||||||||| ||| Sbjct 3957 CAGGGCATTGGCGATCTGCATCGTCATGCGTTCCTGCACTTGCAGGCGCTTGGAGAAGCA 4016 Query 29465 GTCTGCCAGCCGCTTGAGCTTCGAAATACCGACGACTTTGCCGCTCGGGATATAGCCGAT 29524 ||| | || ||| | || ||||| | ||||||| ||||| |||| | || ||||| Sbjct 4017 GTCGACGAGGCGCGTCAGTTTCGACAGGCCGACGATCTTGCCATTCGGCACGTAACCGAT 4076 Query 29525 ATGGGCCGTTCCCATGATCGCCGCCATATGGTGTTCGCAGTGCGAATAGATCGGGATATC 29584 |||| | || | || || |||| ||||||||||| || ||||| || || | Sbjct 4077 GGTGGCCTTGCCGAAGAACGGTGCCAGGTGGTGTTCGCAATGGCTATAGACGGGAATGCC 4136 Query 29585 GCGAACGATAATCCAGTCGTCGGAGCCTTCCGCGCCATCCTCGAACACCTTGAGCACTTC 29644 ||| |||| ||| |||| | | |||||||||||| ||||| | || |||| || Sbjct 4137 GCGCACGACGATCAGCTCGTTGTATTGTTCCGCGCCATCTTCGAAGGCTTTCAGCAGGTC 4196 Query 29645 GGCCGGGTCGTGCATATAGCCCG 29667 | | || | || |||||||| Sbjct 4197 GACAGGATTCTGGCCATAGCCCG 4219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167575326016560