Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq211 259 1e-64 >seq211 Length=76543 Score = 259 bits (286), Expect = 1e-64 Identities = 365/508 (72%), Gaps = 10/508 (2%) Strand=Plus/Plus Query 15026 AACGTGTTCGTTGCGCCCTCGGTGCATGCGATCGGCTGCCTGGCGGCGGTGCAGCCGTGG 15085 ||||||||| | ||||| ||| | || |||| | ||||| ||| ||| ||| Sbjct 17061 AACGTGTTCCTGGCGCCGTCGTCCCTGGCCATCGCCGCGCTGGCCAAGGTCAAGCAATGG 17120 Query 15086 CAAAGCCCCGGCAACCAGGGCGTGTTGATCCAGGGCGTCGCGCGCCACGTGGATTACAAC 15145 ||||||| ||||| |||| || | | | ||| | ||| || || |||||| Sbjct 17121 GAAAGCCCGGGCAATCAGGTGACCTTCGCCGAAGACGTGTCCCGCGTGGTTGAGTACAAC 17180 Query 15146 ATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATCAGCTACTACGCG 15205 || ||||||| || || || |||||||||||||||||||||||| | ||||||||||| Sbjct 17181 ATCCTCGACACCTCCACCGAAGGCGACCTGCTCAACCGCTACGGCGTGAGCTACTACGCC 17240 Query 15206 CGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACCGGCGAGTTTATC 15265 ||||||| ||| ||||| ||||||||| | || |||||| | | |||||| |||| ||| Sbjct 17241 CGCACCATCCTCGGCGGTTTCTCGCTGCTGGGTAACCGCTCCATCACCGGCAAGTTCATC 17300 Query 15266 TCGCACGTAGGCCTTGAAGACGCCATCGGTCGCAAGATCGTC--GGCGCGTCGCAGAAGG 15323 |||| ||||| ||||| || ||| | |||||| | ||| ||| || | ||||| | Sbjct 17301 AGCTACGTGGGCCTGGAAGATGCGATCAGCCGCAAGCTGGTCAAGGC-CGGC-CAGAAAG 17358 Query 15324 CCATGGCGCAGAACTTGACCAAGAGCTTCATGGAGCAGGAGGT---GCGCAAGGTTGATG 15380 ||||||| ||||| |||||||| |||||||| |||||||| ||||| | | | Sbjct 17359 CCATGGCCAAGAACCTGACCAAGTCGTTCATGGACCAGGAGGTCAAGCGCA---TCAACG 17415 Query 15381 CGTTCGTTCAGGATCAGGTTGCTGCTGAGATCATCCCTGGTGGTCGTGTCTATCTGCATC 15440 | | || | ||| || | |||| ||| || || || | || || ||||| | Sbjct 17416 ACTGGCTGCAAACCCTGGTGGCCGACGAGACCATTCCCGGCGGCAGCGTGTACCTGCACC 17475 Query 15441 CTGACCTCAACACGGTCGAGCGCTATAAAAACGGTAGCTGGTACATCGTCATCGAGTACG 15500 | || | |||| |||||| || || ||||| | ||||| |||||||||||| |||| Sbjct 17476 CGGAATTGAACAGTGTCGAGAAGTACAAGAACGGCACCTGGTTCATCGTCATCGACTACG 17535 Query 15501 GCCGCTATTCCCCCAATGAGCACATGAT 15528 ||||||| | || || || |||||||| Sbjct 17536 GCCGCTACGCGCCGAACGAACACATGAT 17563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125441534426670