Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_011222.1 Length=44929 Score E Sequences producing significant alignments: (Bits) Value seq362 100 8e-17 >seq362 Length=339261 Score = 100 bits (110), Expect = 8e-17 Identities = 158/222 (71%), Gaps = 11/222 (5%) Strand=Plus/Minus Query 20131 AACCCGGAGTCAAGAAGGCTAATTGTTAGTGCTTGGAATGTTGGAGAAATACA-CATGAT 20189 || || || || |||||| | ||||| ||| |||||||| | ||| ||| | ||| || Sbjct 148283 AATCCCGATTCCAGAAGGATTATTGTGTCTGCCTGGAATGTGGCAGAGATAGAACAT-AT 148225 Query 20190 GGCACTTCCTCCGTGCCACTGCTTTTTTCAGTTCTATGTGTCTGAGTCCGGTTATTTGGA 20249 ||||||||| || ||||| |||||| ||||| ||||| |||| ||| | || Sbjct 148224 GGCACTTCCACCCTGCCATGCCTTTTTCCAGTTTTATGTAGCTGA---CGGAAAACTGAG 148168 Query 20250 CTTGAAACTGTACCAAAGAAGCGCAGACCTATTTTTAGGCGTTCCTTTCAATATTGCATC 20309 || | || || || |||| ||||| | ||| | || || ||||| || ||||| || Sbjct 148167 CTGTCAGCTTTATCAGCGAAGTGCAGATATTTTTCTGGGGGTACCTTTTAACATTGCCTC 148108 Query 20310 TTATTCTATCTTGCTGTCT---ATGGCTGCACAGGTTTGCGG 20348 ||| | ||| ||| || |||| ||||||||||||||| Sbjct 148107 CTATGC---CTTACTGACTATGATGGTTGCACAGGTTTGCGG 148069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143627309458710