Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_013599.1 Length=36674 Score E Sequences producing significant alignments: (Bits) Value seq1130 172 1e-38 >seq1130 Length=54118 Score = 172 bits (190), Expect = 1e-38 Identities = 597/916 (65%), Gaps = 58/916 (6%) Strand=Plus/Plus Query 21853 TCAAGTCCTTTGATCAGGGCCGCGAGAAATGGCAAGCCGATACGGTCGATTGGGTGTGGT 21912 ||||||| | || |||||||||||||| | || | || ||| | |||| | ||| Sbjct 36893 TCAAGTCATACGACCAGGGCCGCGAGAAGTTCCAGGGTGAGACGCTGGATTTTTTCTGGC 36952 Query 21913 TTGATGAGGAGCCACCCGAAGATGTGTATTTTGAGGGGATCACCCGGACCAATCGGACCT 21972 || |||||||| || ||||| | || | || || | || |||||||| || Sbjct 36953 CCGACGAGGAGCCGCCAGAAGACATTTACATGGAAGGCCTGACGCGGACCAACGCCACGA 37012 Query 21973 TTGGCCCAGTGTTTATGACGTTCACACCGCTGAAGGGCATGTCCAGCGTGGTACGGCGGT 22032 ||| || | |||||||| || ||| || | ||||||||| ||||| ||| | Sbjct 37013 ACGGCATGCTGCTGATGACGTTTACCCCGTTGCAAGGCATGTCCTCGGTGGTGAAGCGCT 37072 Query 22033 TTCTGCTGGAACAAGCCCCTGACAGGGGGCTGGTG--CAG-ATGACCATTGACGACGCCG 22089 ||||| | || || | || | | | | ||| || |||||||| |||| |||| Sbjct 37073 TTCTGATCGATAAATCACCAGGAACG---CACGTGACCACTATGACCATCCACGATGCCG 37129 Query 22090 AACATTACAGCCCTGAGGATCGGGC-GCGCATCATTGCCAGCTACCCCGCCCACGAGCGC 22148 | || |||| ||||||| | || | ||| ||||||||||||||||| || ||||||||| Sbjct 37130 AGCACTACACCCCTGAGCAGCGTGAAGCG-ATCATTGCCAGCTACCCGGCGCACGAGCGC 37188 Query 22149 GAGGCGCGCACCAAGGGCACTCCTTCGCTGGGCAGTGGCCGCGTGTTTCCTATCGCGGAG 22208 || ||||||||||||||| || ||||| || || ||| | | | |||| ||| Sbjct 37189 GATGCGCGCACCAAGGGCGTGCCGTCGCTCGGTTCGGGACGCATTTACGCCATCGACGAG 37248 Query 22209 GACTCGATTGCCATCGCGCCGTTCTCGATTCCTGAAGAATGGGCGTTGATTGGCGGGATG 22268 || || | | ||| |||| |||||| | |||| | | | || || | Sbjct 37249 GAAACGCTCAAGGTACCGCAGTTCGAGATTCCATCGCACTGGGTGCAGTTGGGTGGTCTT 37308 Query 22269 GACTTTGGGTATGACCACCCGTTCGCTGCGGTCAAAATGGCCTGGGATCGTGAAGCCGAT 22328 |||||||| | ||||| ||| || || || || |||||||| || || | || Sbjct 37309 GACTTTGGATGGGACCATCCGAGCGGCGCCGTACGTATCGCCTGGGACCGGGACGAGGAC 37368 Query 22329 GTGATTTACGTGA-TGTGTGCATACCGTCAGCGTGAAGCA-ACCCCTGTGATTCACACAG 22386 ||||| ||||| | || | || |||| ||||| | |||| || || |||| | | Sbjct 37369 GTGATCTACGTCACTGCG-GCGCACCGCCAGCGCG-AGCAGACGCCACTGATGTTC---G 37423 Query 22387 CGG----CATTGAGGCCCTGGGGCGCACATT---TACCCTGGGCGTGGCCGCACGATGGG 22439 ||| |||| | || ||||||| ||| | |||||||| |||||||| ||||| Sbjct 37424 CGGGAACCATT-CGACCTTGGGGCG---ATTGGCTGCCCTGGGCATGGCCGCATGATGGC 37479 Query 22440 TTGCAACACGACAAAGGCAGCGGTGAACAGTTGGCCGAACAATACCGGCAG--CAGGGGC 22497 |||| || |||||||| || || ||| || ||||| |||| ||||| | Sbjct 37480 CTGCAGCATGACAAAGGATCGGGCGAGGCATTGCGGGATCAATA--TGCAGCTCAGGGTC 37537 Query 22498 TTTCCATGCTG--GGGCAACGGGCGA-CCTTC-----------------ACAGACGGCAC 22537 | ||| || || ||| ||| | || || | || ||||| Sbjct 37538 TGCTGATGTTGCAGGACAA--GGCAACCCATCCGCCCGCCGAAGGCAAAGCGGAAGGCAC 37595 Query 22538 C------AACGGCCTTGAAGCAGGCGTCACGGAGATGCTGGACCGGATGCACACCGGACG 22591 | || ||| | || || || |||| || || || ||||| ||| || || || Sbjct 37596 CGGCGGTAATGGCGTCGAGGCCGGTGTCATTGAAATACTTGACCGCATGTTGACAGGCCG 37655 Query 22592 TTTGAAGGTGTTTAGCCACCTGACAGAATGGTTTGAAGAATTCCGGCTCTACCACCGTGA 22651 || ||||||||| ||||| | || ||||||||||| ||||| | || ||||| | Sbjct 37656 CTTCAAGGTGTTTTCGCACCTCAACGACTGGTTTGAAGAGTTCCGCATGTATCACCGCAA 37715 Query 22652 AGACGGGCGGATCGTCAAACACCATGACGACCTGCTCAGCGCGACACGGTACGCGATGAT 22711 ||||| ||| |||| | | || ||| || | || ||||| ||||| || Sbjct 37716 GGACGGCAAGATTATCAAGCTGGACGATGACTTGTTGTCGGCCACACGCTACGCCTACAT 37775 Query 22712 GATGCGGCGGTACGCC 22727 |||||| || | |||| Sbjct 37776 GATGCGCCGCTTCGCC 37791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117215702687160