Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_016650.1 Length=48072 Score E Sequences producing significant alignments: (Bits) Value seq298 82.4 2e-11 seq45 82.4 2e-11 >seq298 Length=58794 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 46644 GGCACGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTC 46703 || ||||||||||||||| ||||| ||||||||||| ||| |||||||||||||| | Sbjct 58653 GGGACGTAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATGC 58594 Query 46704 CCTCCGGGCCTGC 46716 |||||| ||||| Sbjct 58593 CCTCCGTCCCTGC 58581 >seq45 Length=185997 Score = 82.4 bits (90), Expect = 2e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 46649 GTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTCC 46708 ||||||||||||| ||||| ||||||||||| ||| |||||||||||||| ||||||| Sbjct 2879 GTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATTCCCTCC 2938 Query 46709 GGGCCTGC 46716 | ||||| Sbjct 2939 TGACCTGC 2946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153683236785540