Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_016770.1 Length=47159 Score E Sequences producing significant alignments: (Bits) Value seq362 102 2e-17 >seq362 Length=339261 Score = 102 bits (112), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 11/213 (5%) Strand=Plus/Plus Query 3446 CCGCAAACCTGCGCTACCAT---AGACAGCAAGATAGAATAAGACGCAATGTTGAAAGGA 3502 ||||||||||| || ||||| || ||| ||| | ||| || |||||||| ||||| Sbjct 148069 CCGCAAACCTGTGCAACCATCATAGTCAGTAAG---GCATAGGAGGCAATGTTAAAAGGT 148125 Query 3503 ACGCCTAAAAATAGGTCTGCACTTCTTTGATACAGTTTCAAATCCAAATAACCGGACTCA 3562 || || | ||| | |||||||||| ||||| || | | || | ||| ||| Sbjct 148126 ACCCCCAGAAAAATATCTGCACTTCGCTGATAAAGCTGACAGCTCAGTTTTCCG---TCA 148182 Query 3563 GACACATAGAACTGAAAAAAGCAGTGGCACGGAGGAAGTGCCATCATG-TGTATTTCTCC 3621 | ||||| ||||| |||||| ||||| || ||||||||||| ||| | ||| ||| | Sbjct 148183 GCTACATAAAACTGGAAAAAGGCATGGCAGGGTGGAAGTGCCAT-ATGTTCTATCTCTGC 148241 Query 3622 AACATTCCAAGCACTAACAATTAACCTTCTTGA 3654 |||||||| ||| ||||| | |||||| || Sbjct 148242 CACATTCCAGGCAGACACAATAATCCTTCTGGA 148274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150762122675010