Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq6140 91.5 2e-13 >seq6140 Length=1248 Score = 91.5 bits (100), Expect = 2e-13 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 39629 TCGCGGGATC--ATCGTTTCCGCATGGAACCCTGTTGATC-TGGATGATATGGCTCTGCG 39685 |||||| || ||||||||||||||||| || | | || | ||||| ||||| |||| Sbjct 641 TCGCGGCGTCTGATCGTTTCCGCATGGAATCCGGC-GCTCGTCGATGAAATGGCGCTGCC 583 Query 39686 TCCGTGTCACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTA 39745 || || ||||| | ||||||||| ||| | |||| || || || ||| || Sbjct 582 GCCCTGCCACTGCCTGTTCCAGTTCTACGTGGCCGACGGAAAGCTTTCCTGCCAGCTCTA 523 Query 39746 TCAGCGTTCAGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCT 39805 ||||| || | ||| |||| | || |||||||||||||||| ||||| || || || Sbjct 522 CCAGCGCTCCGCCGATATCTTTCTCGGCGTGCCGTTCAATATCGCATCCTATGCCCTGCT 463 Query 39806 GAC 39808 ||| Sbjct 462 GAC 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569989798689400