Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq165 91.5 2e-13 >seq165 Length=230050 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/91 (84%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 19135 CAATCCTCTATAGCTCAGTTGGTAGAGCAGGTGACTGTTAATCACCCTGTCCCTGGTTCG 19194 || ||| | |||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 48884 CATTCCGCGATAGCTCAGTTGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCG 48943 Query 19195 AGTCCAG---GTGGAG-GAGTTAGTAAAAAA 19221 ||||||| |||||| || |||||||||| Sbjct 48944 AGTCCAGGTCGTGGAGCCAGATAGTAAAAAA 48974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563111003119400