Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_019485.1 Length=59080 Score E Sequences producing significant alignments: (Bits) Value seq328 84.2 8e-12 >seq328 Length=55360 Score = 84.2 bits (92), Expect = 8e-12 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 55547 CGGGATATAGCTCAGTTTGGTAGAGTGTCTGCTTTGGGAGCAGAATGTCGTTGGTTCAAG 55606 |||| |||||| |||| ||||| | | ||||||||||||||| ||||| |||| | Sbjct 54043 CGGGGTATAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAA 54102 Query 55607 TCCAGCTATCCCGACCA-ATTAGTGCCTTTAGCTCAGACGGTTAGAGCAGCCGACTCATA 55665 ||| || |||||||| ||| | | | ||||||||| || |||||||| | || || Sbjct 54103 TCCCCTTACCCCGACCATATTTGGGTCGTTAGCTCAGTTGG-TAGAGCAGTTGGCTTTTA 54161 Query 55666 ATCGGTAGGTCACAGGTTCAAATCC 55690 | | | |||| |||||| ||||| Sbjct 54162 ACCAATTGGTCGTAGGTTCGAATCC 54186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188902978438020