Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq58 109 3e-19 >seq58 Length=338205 Score = 109 bits (120), Expect = 3e-19 Identities = 151/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 17072 CTGCCTCGCAGTGGCCTTGGGCATAAATCTGGCATTGTACTTGGGAACCTGGTGGGTCTG 17131 ||||| ||| ||||| || || ||| ||||| || || || ||||||||||| ||| Sbjct 259784 CTGCCGCGCTCCGGCCTGGGCCACAAACACGGCATCGTCCTCGGCAACCTGGTGGGGCTG 259843 Query 17132 ATTGATTCGGACTATCAGGGTGAGCTGAAGGTTTCCCTGTGGAACCGCAGCGCTGAAC-C 17190 || || |||||||| ||||| ||| ||| ||| ||| |||||||| || | || | | Sbjct 259844 ATCGACTCGGACTACCAGGGCGAGTTGATGGTGTCCTGCTGGAACCGTGGC-CAGACCGC 259902 Query 17191 ATACACTGTCAGCCCT-GGTGAGCGTGTTGCCCAAATGGTTATCGTGCCAGTAGTGCAGG 17249 | || | || ||| | || ||||| |||||||| | || | || || || ||||||| Sbjct 259903 GTTCAATATC-GCCGTCGGCGAGCGCATTGCCCAACTCGTGCTGGTACCGGTGGTGCAGG 259961 Query 17250 CACAGTTTGAGCTGGTTGATGAATTC 17275 | || || |||||||| || || ||| Sbjct 259962 CGCACTTCGAGCTGGTCGAAGAGTTC 259987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238775237467150