Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq7867 89.7 5e-13 >seq7867 Length=396 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 39834 TGGGATCAGCTTTTCTGGATGTTGATAAGGCCCAAAGTTATTGGAGCAGTTGGTTATCAC 39893 ||| || |||||||| ||| || | || ||| | || || |||||||| | | || Sbjct 22 TGGAATGAGCTTTTCCGGAAAATGGAAGGGACCATAATTGTTCGAGCAGTTCGACAGAAC 81 Query 39894 AACAGGCAAATCGTAGGTGCGGTGCCAAGCTTTCACAAGATGGTCAGATGCTGCCTTAGA 39953 || |||| | | || || |||||| || || |||||||| || |||||||| || Sbjct 82 CACCGGCAGACCATATGTCTCGTGCCACGCGCGGACCAGATGGTCCGAGGCTGCCTTTGA 141 Query 39954 CGCACTGTACGGGCTTGAAGGGGCATAAGCTGTCTCTTCGGTAAAGGGAACGCCAGAGTC 40013 ||| |||||| ||| || ||||||| || |||||||||||| | ||| ||| Sbjct 142 CGCCGAGTACGGAGATGACGGTGCATAAGGCGTTTCTTCGGTAAAG---ATGCCGCTGTC 198 Query 40014 ---TGCCATATCGCCGTACACTTCGTCTGTGGAGACGTG 40049 || || ||| ||| | || ||||| ||||| | ||| Sbjct 199 GAATGGCAAATCCCCGAAAACCTCGTCCGTGGAAATGTG 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472547660140600