Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_020081.2 Length=149844 Score E Sequences producing significant alignments: (Bits) Value seq1156 89.7 5e-13 >seq1156 Length=71941 Score = 89.7 bits (98), Expect = 5e-13 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 122068 TCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCGACTGAGCTACCAGTCCAA 122127 ||||||| |||||||| ||||||||| || |||||||||||||||||||||||| |||| Sbjct 48770 TCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTACCAGGCCAA 48829 Query 122128 GGTG 122131 |||| Sbjct 48830 GGTG 48833 Score = 86.0 bits (94), Expect = 6e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 122068 TCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCGACTGAGCTACCAGTCCAA 122127 ||||||| |||||||| ||||||||| || |||||||||||||||||||||||| |||| Sbjct 43281 TCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTACCAGGCCAA 43340 Query 122128 GG 122129 || Sbjct 43341 GG 43342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479288879799200