Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq367 129 1e-25 >seq367 Length=135625 Score = 129 bits (142), Expect = 1e-25 Identities = 241/342 (70%), Gaps = 14/342 (4%) Strand=Plus/Plus Query 10369 CCTTCGAGGGGTTCGTTATCGAGCGCGTGAAGGCAG-GCCCATGCGAGGTCAGCGTGGCC 10427 ||||| ||||||||||| | |||||||| | ||| ||||| || ||||| || ||||| Sbjct 46009 CCTTCAAGGGGTTCGTTGTGCAGCGCGTGGAA-CAGCGCCCACGCTAGGTCGGCATGGCC 46067 Query 10428 GATTTCTTCGTTACGCGCGGCGGTGTAGGTCATCTTCGTGCCGCTCGGCG-TCATGGCTC 10486 | || || | || |||| ||||| || | | | | ||| |||| | || | | Sbjct 46068 CGTCTCGTCTGTGCGACCGGCCGTGTAAGTGAACAT-GCGCCCGGAGGCGGTGATTGTTT 46126 Query 10487 GGCGGATGGACAGGAACGATTGCGCGAGGTCGGTCATACCTGCGTCGAATTCCAGGC-GC 10545 |||||| | || || || ||||| | || ||| || || ||||| ||||| | || Sbjct 46127 TGCGGATAGCCATCAATGACTGCGCCATATCCGTCCAGCCCGCATCGAACTCCAGCCTGC 46186 Query 10546 --TTTTTCCCGATCACCGACAT--GCCTTTCAGGACAAGGCGGTTTTTCACTTCGGGCGA 10601 ||||| ||| || | | | ||||| ||| || |||||| |||| |||||||| || Sbjct 46187 CGTTTTT---GATGAC-GTCGTAAGCCTT-CAGCACCAGGCGGGTTTTGACTTCGGGTGA 46241 Query 10602 GTAATTGATCGGTACGACGCGCGGGAAGAACTGGCGCACAAGCTGATGCACGCCGTGACC 10661 ||| ||| || || | |||||||||||| ||| ||||| ||||||| ||| Sbjct 46242 GTAGCTGAACGTGGTGATGTTCGGGAAGAACTGCTTCACCAGCTGCGCCACGCCGGAACC 46301 Query 10662 GATGCCGGTCGTATCGATCGCGATATAGGTCACGTGGTAGCG 10703 ||||||| |||||||| |||| |||||||| |||||| Sbjct 46302 CGTGCCGGTGATATCGATCCCGATGTAGGTCACCCAGTAGCG 46343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113235564731520