Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq367 143 5e-30 >seq367 Length=135625 Score = 143 bits (158), Expect = 5e-30 Identities = 241/344 (70%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 369 AAGTCATCCTTTGTGGCGACCTCGCTCAATGGCACGATTTTTATGCCGTCCGGTTTCCCG 428 || || ||||| | || |||||||||| || | || | |||||||| || || Sbjct 45156 AATTCGTCCTTGGCCGCAACCTCGCTCACCGGGATGAGCTGAATGCCGTCTTTCTTGCCT 45215 Query 429 TTCGGTGAGTAGAAAAACAGGTTTTTAAAGTTGCCGAGCCCTTTAGAGTTACGCATTGCA 488 ||| | ||| | ||||||||| ||||||||| ||||||| ||||| || ||| Sbjct 45216 GCCGGCGCGTACACAAACAGGTTGCGAAAGTTGCCTGGCCCTTTCGAGTTCTTCAGTGCG 45275 Query 489 TCGCGCAGCGATTCGACGTCAGTCGCGCTT-TGCGCCGGGTCAGTCACATACATGATGTA 547 |||||| || |||| ||| || ||| ||||||| ||| |||| |||| ||| | Sbjct 45276 GTGCGCAGTGAGTCGATGTCC-TCTTCCTTCTGCGCCGCGTCGGTCATGTACAGAATGAA 45334 Query 548 ACCTGCGTGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGCGTCGCGGATTCATTCAG 607 ||| || || |||||| | ||| |||||||| ||||||||||| ||| || || || Sbjct 45335 ACCGGCATGGCTGCCGTTGTTGTAGTACTTGCGCCGGAACAGCGTGGCGCTCTCGTTGAG 45394 Query 608 CCAGGCGGAATTAAGTGCGCTG--AGATATTCAGGCAGGCCGTAAATCTCCTGATTAATA 665 | ||| || |||||| || | || ||||||||||| || ||||| || ||| Sbjct 45395 CAGTGCG--CTTTGCAGCGCTGCCAGCCACTCCGGCAGGCCGTAGATTTCCTGGTTGATA 45452 Query 666 TCAGGCTCCAGCAGGTGGAACACGGTATCGGGTGCGAATTCATG 709 || | ||| ||| |||| | | | | |||| || |||||||| Sbjct 45453 TCGGCCTCGCGCAAGTGGCAGATCGAACCGGGGGCAAATTCATG 45496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95036991828240