Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq1143 277 9e-70 seq211 269 1e-67 seq7489 251 3e-62 seq4107 96.9 2e-15 seq1862 91.5 7e-14 seq1863 82.4 4e-11 >seq1143 Length=31399 Score = 277 bits (306), Expect = 9e-70 Identities = 553/806 (69%), Gaps = 25/806 (3%) Strand=Plus/Plus Query 66094 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 66153 ||||| || ||| ||||| ||| |||||| | || || | ||| | ||||| ||| Sbjct 23731 ACCGGTTCGCTCGGCCTGGATATCGCGCTGGGCGTGGGCGGCTTGCCGCGCGGCCGCGTG 23790 Query 66154 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 66213 |||||||||||||| || ||||| || || || | || ||| || || | | || Sbjct 23791 GTGGAAATCTACGGTCCGGAATCGTCGGGTAAAACCACCCTGACCCTGCAAACCATTGCT 23850 Query 66214 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCC 66273 | ||| || || || | | ||||| ||||| || |||||| | || ||| | Sbjct 23851 GAAATGCAAAAACTGGGCGGTACCTGCGCCTTTATCGATGCCGAGCACGCGCTCGACGTC 23910 Query 66274 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACT 66333 | ||||| | ||| || ||| |||| | | | || | |||||||| || Sbjct 23911 GGCTACGCGCAAAAGCTGGGCGTGAACCTGCATGAATTGCTGATTTCGCAGCCGGATACG 23970 Query 66334 GGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCG 66391 ||||||||||| ||||| ||| ||| |||||| ||| ||| ||| ||| | ||| Sbjct 23971 GGCGAGCAGGCGCTGGAAATCTGCGACGCCCTCGTGCGGTCGGGC-AGC-GTCGACCTCG 24028 Query 66392 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 66451 | ||| | ||||| ||||| || ||| ||| ||||||||| ||||||||||||| || | Sbjct 24029 TTGTCATCGACTCCGTGGCCGCACTGACGCCACGCGCCGAGATCGAAGGCGACATGGGTG 24088 Query 66452 ACAGTCACGTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGG 66509 | || | | |||||||| |||||||| |||||||| || |||||||||| ||||| Sbjct 24089 AT--TCCCTGCCGGGCCTGCAAGCGCGCCTGATGTCGCAAGCGCTGCGCAAGCTGACCGG 24146 Query 66510 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGG 66569 ||||| | |||| || || ||| ||| |||||||| | ||| ||||||||| Sbjct 24147 TTCCATCAACCGCACGAATACCCTGGTCATCTTCATCAACCAGATCCGCATGAAGATCGG 24206 Query 66570 CAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGC 66629 | || | | ||||| || |||||||| ||||| || || ||| |||||||| Sbjct 24207 CGTGATGTTCGGCAGCCCG---GAAACCACCACCGGCGGCAATGCCCTGAAATTCTACGC 24263 Query 66630 CTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGG 66689 || || ||| |||| |||| |||| || | | ||| |||||||| | |||| Sbjct 24264 GTCCGTGCGCCTGGACATCCGCCGCACCGGCTCGATCAAGTCCGGCGATGAAGTGATCGG 24323 Query 66690 CAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCG--CACCGCAACGCC 66747 |||| ||| ||| || ||||||||||||||| | || || ||| || | | ||| Sbjct 24324 CAACGAAACCAAGGTCAAGGTCGTCAAGAACAAGATCGCGCCACCGTTCAAGGAAGCGC- 24382 Query 66748 GAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCC 66807 | ||| | || ||||||| | |||| ||||| || | |||| |||| ||||||| Sbjct 24383 -ACTTCGACATCCTGTACGGCGCCGGCACGTCGCGCGAAGGCGAAATCCTGGACCTGG-- 24439 Query 66808 GTGTCGCAGGGC---CTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAAC 66864 || ||| | | | | ||| |||| || || | |||| || ||| | | |||| Sbjct 24440 GT-TCGGACGCCAAGATCGTGGAGAAATCCGGTTCGTGGTACAGCTACAACGGC--GAAC 24496 Query 66865 G--TCGCCCAGGGCAAGCCCAAGGCC 66888 | ||| |||||||||| ||| ||| Sbjct 24497 GCATCGGCCAGGGCAAGGACAACGCC 24522 >seq211 Length=76543 Score = 269 bits (298), Expect = 1e-67 Identities = 541/798 (68%), Gaps = 13/798 (2%) Strand=Plus/Plus Query 66092 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66151 |||| |||||| | | ||||||| ||| || ||||| || || || | ||||| Sbjct 35751 CCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCGGCCTGCCAAAAGGCCGTA 35810 Query 66152 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66211 | || || |||||||| || |||||||| || || | || ||| || | | | | Sbjct 35811 TCGTTGAGATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTGATTG 35870 Query 66212 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 66271 || | || || || || | || | || | | |||| || |||||| ||||||| | Sbjct 35871 CCCAGGCACAAAAAATGGGCGCCACCTGTGCGTTCGTCGATGCCGAGCACGCCCTGGATC 35930 Query 66272 CCGAGTACGCCAAGGC--GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGA 66329 | || |||||| ||| ||| || || || | ||| |||| |||| || ||||| Sbjct 35931 CTGAATACGCC--GGCAAGCTGGGCGTCAACGTTGACGACCTGCTGGTTTCGCAACCGGA 35988 Query 66330 CACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCAT 66389 ||| || ||||| || ||||| ||| ||| | || || || || | | | Sbjct 35989 CACCGGTGAGCAAGCGCTGGAAATCACCGACATGCTGGTGCGCTCCAACGCCATCGACGT 36048 Query 66390 CGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGG 66449 |||| || ||||| ||||| |||||||| || || || |||||||||| || || Sbjct 36049 GATCGTGGTCGACTCCGTGGCAGCCCTGGTACCCAAGGCTGAAATCGAAGGCGAAATGGG 36108 Query 66450 GGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGG 66509 |||| ||||| ||||| || || ||| | ||||| |||||| |||| || ||||||| Sbjct 36109 CGACATGCACGTGGGCCTTCAAGCCCGCTTGATGTCCCAGGCCCTGCGTAAAATCACCGG 36168 Query 66510 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGG 66569 | |||| | | ||||| || | ||| |||||||| | || ||||||||| Sbjct 36169 TAACATCAAGAACGCCAACTGCTTGGTGATCTTCATCAACCAGATCCGGATGAAGATCGG 36228 Query 66570 CAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGC 66629 | || | | ||||| || |||||||| || || || || ||| ||||||||| Sbjct 36229 CGTGATGTTCGGCAGCCCG---GAAACCACCACCGGTGGTAACGCGCTGAAGTTCTACGC 36285 Query 66630 CTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGG 66689 || ||||| |||| ||||||| | | | | | ||||||||| || |||| ||| || Sbjct 36286 TTCGGTCCGTCTGGACATCCGTCGTACTGGCGCGGTGAAGGAAGGTGACGAGGTTGTTGG 36345 Query 66690 CAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGA 66749 | | ||||| || |||||||| ||||||||| ||||||||||| ||| | ||||| Sbjct 36346 TAGCGAAACCCGCGTTAAAGTCGTGAAGAACAAGGTGGCCCCGCCGTTCCGTCAGGCCGA 36405 Query 66750 GTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGT 66809 |||| | | ||||| |||| |||| | | | ||| | ||||||||| ||| Sbjct 36406 GTTCCAGATTCTCTACGGCAAGGGTATCTACCTGAACGGCGAGATGATCGACCTGGGCGT 36465 Query 66810 GTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT---TCAAGTACGGGGACAAGAACGT 66866 | ||| || | || |||| || || ||||||| | | |||| ||||| | Sbjct 36466 GCTGCACGGTTTCGTCGAGAAATCCGGTGCCTGGTATGCCTACAACGGCAGCAAGA---T 36522 Query 66867 CGCCCAGGGCAAGCCCAA 66884 || |||||||||| |||| Sbjct 36523 CGGCCAGGGCAAGGCCAA 36540 >seq7489 Length=570 Score = 251 bits (278), Expect = 3e-62 Identities = 397/564 (70%), Gaps = 21/564 (4%) Strand=Plus/Plus Query 66199 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66258 || ||||| || |||||||| ||| ||| |||| ||| || | ||||||||| ||| Sbjct 11 CTGCACGCAGTTGCCAATGCTCAGGCCAACGGCGGCATCGCGGCGTTCATCGACGCGGAG 70 Query 66259 CACTCCCTGGACCCCGAGTACGCCAAGGC--GCTCGGTGTGGACCTCGACAACCTCGTGG 66316 ||| | || || ||||| || || || | ||| || || || ||| ||| ||| Sbjct 71 CACGCACTCGATCCCGACTATGC--AGCCAAGCTGGGCGTCGATACCGATGCACTCCTGG 128 Query 66317 TGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTG 66376 | ||||||||||| || ||||||||||| || ||| ||| | || || || | Sbjct 129 TCTCGCAGCCGGACACGGGTGAGCAGGCCCTCGAAATCACCGACATGCTGATCCGTTCAG 188 Query 66377 GCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66436 ||| || ||||||||| | ||||| ||||| || || || || ||||||||| ||| Sbjct 189 GCGCCCTCGACATCGTCGTGATCGACTCCGTGGCCGCTCTTGTTCCTCGCGCCGAGATCG 248 Query 66437 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGC 66496 ||||||| || || ||||| |||||||| |||| || || || ||| ||||| ||| Sbjct 249 AAGGCGAGATGGGTGACAGCCACGTCGGTTTGCAGGCTCGACTGATGAGCCAGGCGCTGC 308 Query 66497 GCAAGCTCACCGGCACCATCTCCAGCAC---CAACACGCTGACGCTCTGGGTCAACCAGT 66553 ||||| ||||||| |||| || | | || ||| | | ||| |||||||| Sbjct 309 GCAAGATCACCGGTGCCATGAACAACTCGGGCACCACCGTCA---TCTTCATCAACCAGC 365 Query 66554 TGCGCGAGAAGATCGGCAACGTGGGCTACGG----CCCGAATGAGACCACCACGGGCGGA 66609 | |||||||||||||| ||| | ||| |||||| |||||||| || || Sbjct 366 TTCGCGAGAAGATCGG---TGTGATGTTCGGTTCTCCCGAA----ACCACCACCGGTGGT 418 Query 66610 AAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAG 66669 ||||| ||| ||||||||| || |||||| | || ||||||| |||| || ||| Sbjct 419 AAGGCACTGAAGTTCTACGCTTCGGTCCGCCTCGACATCCGTCGTATCGAAACTCTCAAG 478 Query 66670 GAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCC 66729 || || || || || || |||||||| || || || ||||||||||||||| | || Sbjct 479 GACGGTACCGACGCAGTGGGTAACCGCACTCGCGTCAAGGTCGTCAAGAACAAGGTCGCG 538 Query 66730 CCGCCGCACCGCAACGCCGAGTTC 66753 |||||| | | ||||||||| Sbjct 539 CCGCCGTTCAAGCAGGCCGAGTTC 562 >seq4107 Length=847 Score = 96.9 bits (106), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 66561 GAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAG 66620 |||||||||| ||| | ||| || ||| ||||| |||||||| || || ||| Sbjct 2 GAAGATCGGC---GTGATGTTCGGTTCGCCTGAAACCACGACGGGCGGCAATGCGCTGAA 58 Query 66621 GTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGA 66680 ||||| || || || || | ||| |||| ||||||| | ||||||| | || || Sbjct 59 ATTCTATGCTTCGGTGCGTCTCGATATCCGCCGCATCGGTGCGCTGAAGGAACGTGACGA 118 Query 66681 GGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCC 66734 || |||||||||| ||||| || || || |||||||||||||| || || || Sbjct 119 GGTGGTCGGCAACCAGACCCGCGTCAAGGTGGTCAAGAACAAGCTTGCGCCCCC 172 >seq1862 Length=5913 Score = 91.5 bits (100), Expect = 7e-14 Identities = 134/188 (71%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 60451 GACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCG 60510 |||||||| || ||| | || |||| |||||||||||| || ||||||||||| ||| Sbjct 5330 GACGGCGATGCGCTGTTCATGCGTTGCAACATCTGGCGCGAAGCAGCCGAGAACGTCGCG 5389 Query 60511 GAAAGCCT--CCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCT 60568 || ||| | || | || || || |||||| ||| ||||||||||| || | Sbjct 5390 GAGAGCTTGACCCG--TGGTTCACGAGTAATCGTGAGCGGCCGGCTCAAGCAGCGTTCGT 5447 Query 60569 TCGAGACCAAGGAAGGCGACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCC 60628 ||| || || ||||| ||||| || ||| ||||| | || || || || ||||| | Sbjct 5448 ACGAAACTCGCGAGGGCGAAAAGCGAACTGTCGTCGAGCTCGAAGTCGATGAAATCGGTC 5507 Query 60629 CGTCGCTG 60636 | || ||| Sbjct 5508 CTTCACTG 5515 >seq1863 Length=4856 Score = 82.4 bits (90), Expect = 4e-11 Identities = 142/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 50517 CAACCACCCCAGGACCTAGCCGCCGAGTCAG-CAGTCCTCGGCGCCATGCTTCTCTCCAA 50575 || ||||| |||||| | | |||||| ||| | || ||||||| |||||| || ||| Sbjct 3709 CAGCCACCTCAGGACATGACTGCCGAG-CAGTCGGTGCTCGGCGGCATGCTGCTGAGCAA 3651 Query 50576 GAACGCCACCCCGGCCGTCATGGAGATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 50635 | |||||| | | | |||| | ||| | || || | ||||||||||| ||| || Sbjct 3650 GGACGCCATCGCTGACGTCCTCGAGGTACTGCGTCCGGGTGACTTCTACCGGCCCGCTCA 3591 Query 50636 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCC--GGTGAGTCCGCCGACGTC 50693 | |||||||| | | ||| |||||||||| ||| || ||| |||||||| Sbjct 3590 CCAGTCCGTCTACGACGTGATCCTGGACCTCTACA--GCCGTGGCGAGCCCGCCGACCCG 3533 Query 50694 ATCACCGTCGCCGCGGAGCTCG 50715 | || ||| |||| ||||||| Sbjct 3532 GTGACGGTCTCCGCCGAGCTCG 3511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242694568378275