Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq256 89.7 6e-13 seq6900 84.2 2e-11 >seq256 Length=183033 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 74609 TGGTGACCCCAGCAGGACTCGAACCTGCAACCTAGCGATTATGAGTCGCGTGCTCTAACC 74668 ||||| ||||| ||||||||||||| | ||| || ||||||||||| | |||||||||| Sbjct 58884 TGGTGGGCCCAGTAGGACTCGAACCTACGACCAAGGGATTATGAGTCCCCTGCTCTAACC 58825 Query 74669 AATTGAGCTATAGGGCC 74685 || ||||||||||| || Sbjct 58824 AACTGAGCTATAGGCCC 58808 >seq6900 Length=1781 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 72104 TGGTGCCGGTTAACGGATTCGAACCGCTGACCCTCTCATTACAAATGAGCTGCTCTACCA 72163 |||||||| || |||| |||||||| ||||| ||||||| ||||| |||||||||| Sbjct 98 TGGTGCCGCTTCCCGGAATCGAACCGAGGACCCCATCATTACGAATGATGTGCTCTACCA 39 Query 72164 ACTGAGCTAAACCGGC 72179 ||||||||||| |||| Sbjct 38 ACTGAGCTAAAGCGGC 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554258153192800