Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_023591.1 Length=95705 Score E Sequences producing significant alignments: (Bits) Value seq3834 98.7 6e-16 >seq3834 Length=3552 Score = 98.7 bits (108), Expect = 6e-16 Identities = 153/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 46107 GCGGCAGCCAGGCCCTTGATTCGATCGGGTCGGAAGCCACTGAAATGGGTGTCTGCGTCG 46166 ||| | | |||| |||||| ||||| || |||||||| | || ||| | || Sbjct 561 GCGACGGTCAGGGTCTTGATGCGATCAGGACGGAAGCCCGACCAGTGA---TCTTCACCG 505 Query 46167 ACCACGACGACGGGTACTTGCTGGTATCCGAGAGATGTCACGTATTCGTACGCTTCAGCG 46226 | || |||| |||| | || |||| ||||||| | ||||| ||| ||||| || Sbjct 504 GCAACCACGATGGGTGCCTGGAGGTACCCGAGAGCCATGACGTAGTCGCGGGCTTCGGCA 445 Query 46227 TTTTCATTGACATCGATCTTGCGGTATTCGATACCTTGCTTTTCAAGGGCTTTGAAGGTC 46286 | || ||| ||||| | |||||||| ||| ||| || ||||| | |||| Sbjct 444 TCCTCGGTGATGTCGATGACGTTGTATTCGAGACCGGCCTTGTCCAGGGCGCGGTAGGTG 385 Query 46287 GCATTGCATTGGACGCATGCGGGCTTGGTGTAGACGGT 46324 |||||||| || ||||| |||||||||||||||||||| Sbjct 384 GCATTGCACTGAACGCAAGCGGGCTTGGTGTAGACGGT 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 306078947709130