Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_023602.1 Length=50781 Score E Sequences producing significant alignments: (Bits) Value seq1733 118 3e-22 >seq1733 Length=35939 Score = 118 bits (130), Expect = 3e-22 Identities = 247/367 (67%), Gaps = 6/367 (2%) Strand=Plus/Plus Query 7876 AACGTCGGCGTTTACGAGCCCGGCCGCGACATCTCCGGCCGCGCCAGCGCAGCCGTCACC 7935 ||| ||| || |||| ||||| ||||||| ||| | ||| | ||| | || | Sbjct 1638 AACATCGATGTCTACGCCCCCGGAGCCGACATCACCGCCAACGCAACCGCCGATGTACTC 1697 Query 7936 GGGAAGCGATTCCTGAAGATCTCCGGCAACCGCAACGGCGGCAACATCGCCGTTGCACAC 7995 | ||||||||| | || ||||||||||| |||||||||||||||||| || || Sbjct 1698 GCCAAGCGATTCGTCCGCGTCACCGGCAACCGCGTCGGCGGCAACATCGCCGTAGCGCAT 1757 Query 7996 GCGGACGCCGGCGGACGTGTCTGCGGCGTCTCCAAGTACGACGCGGCATCCGGCGCGATC 8055 || ||| | ||| || ||| || ||| ||||| | |||||| || || || Sbjct 1758 GCCACCGCGGCCGGCCGCATCTTCGCAGTCGCCAAGCATGACGCGAAGAGCGCCGAACTC 1817 Query 8056 GTCGGCGTCGCGCGCGGCAATTCCCG---CGTCACTCACGTCACCGCGAGCGGCGCGCTC 8112 ||| | | ||||||||| || || ||||| | || || || || ||| || Sbjct 1818 GTCTCCCTTGCGCGCGGCGCATCACGGATCGTCA---AAGTGACAGCCGGCAGCGTCATC 1874 Query 8113 GCGGCGTTCGACGAAGTCCAGGTCGGTACCAACGGCACGGCGGTCAAGCTCGACGCCGGC 8172 || ||||||| ||| || ||||||| | |||||| |||| || |||| |||| Sbjct 1875 GCAGCGTTCGCCGAGGTGGAGGTCGGCGCAGACGGCAAGGCGATCGCCCTCGCATCCGGT 1934 Query 8173 GTCGCCGTGGGATACGCGCTGACCGCAGCAACCAACGGCGGCGACGCCGAGATCAGCCTC 8232 |||||||| ||||| | |||| ||| | ||| |||||| | ||| |||| Sbjct 1935 AAGGCCGTGGGCTACGCCGTCACCGGCGCAGCATCCGGTTCCGACGCTCAAATCTCCCTC 1994 Query 8233 TACTGAA 8239 ||||||| Sbjct 1995 TACTGAA 2001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162350595082830