Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq1025 228 3e-54 >seq1025 Length=252982 Score = 228 bits (252), Expect = 3e-54 Identities = 296/407 (73%), Gaps = 4/407 (1%) Strand=Plus/Plus Query 188785 ACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTA 188844 ||||| | || |||||| | || || | ||| | || | || |||||||| ||| | Sbjct 236030 ACTGGAACTGGCAAAACACTTTTGGCAAAGACAATTGCAAAAATATTACATGTTCCTTTT 236089 Query 188845 GCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAAC 188904 ||| | |||||| || ||||||||| || |||||||| |||||||||||||||| Sbjct 236090 TGTATTTGTGATGCTACAGTTTTAACAGAGGCAGGTTATGTTGGTGAAGATGTGGAAA-- 236147 Query 188905 GTAT--TGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAA 188962 |||| | |||||| | || || || ||||| ||| | | | || |||||||||| Sbjct 236148 GTATCCTAACCCGTTTACTGCAGGCGGCCGATTATGATGTGGCTTCTGCCGAACGTGGAA 236207 Query 188963 TTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCC 189022 |||| || |||||||| || |||||| |||| | ||| || | | || |||||| Sbjct 236208 TTGTTTACATCGATGAGGTTGATAAAGTTGCACGTAAAAGCGATAATCCTTCAATTACCA 236267 Query 189023 GAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTG 189082 | |||||||| || ||||| || |||||||| || | || ||| ||||||||||||| | Sbjct 236268 GGGATGTATCCGGAGAAGGTGTTCAGCAAGCGCTACTTAAGATCCTTGAAGGTACAGTGG 236327 Query 189083 CGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATA 189142 ||| || |||||||| || || ||||| || ||| | || ||||| || | ||| Sbjct 236328 TGAATGTCCCTCCTCAGGGCGGACGTAAGCATCCTGATCAGAAAATGATTCCTGTGAATA 236387 Query 189143 CAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAA 189189 ||| ||| || || |||||| ||| || || |||||||| ||||| Sbjct 236388 CAAATAACATTTTATTTATTTGTGGAGGTGCATTTGATGGGATTGAA 236434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591624749090240