Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_023743.1 Length=47180 Score E Sequences producing significant alignments: (Bits) Value seq179 86.0 2e-12 >seq179 Length=18974 Score = 86.0 bits (94), Expect = 2e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 28223 ACCGCCGTTTGCGTATCCGCGCATCAACTTGTACAGGTTGTCTACGCCAATCCTTGAAGT 28282 ||| ||| | || || |||||||||| | ||| || || | |||||||||| || Sbjct 12237 ACCACCGGTGGCATAGCCGCGCATCAGCCGGTAGAGATTCCCCACGCCAATCCGGCTGGT 12178 Query 28283 TGCCTCCTTCGTAAACACGAATTCACCACGATGCACCGTACCAGCTGGTTCATACTTACC 28342 ||||||||| || || || ||||||||||| || || | || ||||| ||||| || || Sbjct 12177 TGCCTCCTTTGTGAAGACAAATTCACCACGGTGAACAATCCCCGCTGGCTCATATTTGCC 12118 Query 28343 TCCGTTACCAGTGTAGCCACCAGATGCAAA 28372 ||| | || || | || || | |||||| Sbjct 12117 GCCGGTTCCCGTAAATCCTCCGGTTGCAAA 12088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150829311499020