Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_024792.1 Length=160281 Score E Sequences producing significant alignments: (Bits) Value seq1156 87.8 2e-12 >seq1156 Length=71941 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 132311 GGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCAACTGAGCTACCAGT 132370 ||| ||||||| |||||||| ||||||||| || |||||||||| ||||||||||||| Sbjct 43277 GGAATCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTACCAGG 43336 Query 132371 CCAAGGCG 132378 |||||||| Sbjct 43337 CCAAGGCG 43344 Score = 84.2 bits (92), Expect = 2e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 132311 GGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCAACTGAGCTACCAGT 132370 ||| ||||||| |||||||| ||||||||| || |||||||||| ||||||||||||| Sbjct 48766 GGAATCGAACCACCGACACAAGGATTTTCAATCCTCTGCTCTACCGACTGAGCTACCAGG 48825 Query 132371 CCAAGG 132376 |||||| Sbjct 48826 CCAAGG 48831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512681432991800