Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6140 149 7e-31 seq7603 147 3e-30 >seq6140 Length=1248 Score = 149 bits (164), Expect = 7e-31 Identities = 193/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| | |||||| |||| ||||| || ||||| ||||| || || || ||||||| Sbjct 371 GCTCGAAATGGTTGGCATAGAGATGCGCATCGCCCAGCGTGTGAACGAAATCACCCGGCT 430 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 || || || || || ||||||||| ||| ||||| | ||| || || ||||| | Sbjct 431 GCAGACCCGTGACCTGCGCCACCATGAGGGTCAGCAGGGCATAGGATGCGATATTGAACG 490 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | || || || || || | || | |||||| |||||||| || |||| ||||||| Sbjct 491 GCACGCCGAGAAAGATATCGGCGGAGCGCTGGTAGAGCTGGCAGGAAAGCTTTCCGTCGG 550 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 ||||||| |||||| ||||| |||||| |||||||||||||| | | | ||| | Sbjct 551 CCACGTAGAACTGGAACAGGCAGTGGCAGGGCGGCAGCGCCATTTCATCGACGAGCGCCG 610 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCC 147190 | ||||| || || || | ||| |||| Sbjct 611 GATTCCATGCGGAAACGATCAGACGCC 637 >seq7603 Length=749 Score = 147 bits (162), Expect = 3e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 ||||||| ||||| ||||||||||| ||||||||| |||||||| || || || ||| | Sbjct 622 TGGGCCATCATGTGGGTGAGCAGCGCGTAGCTGGCGATGTTGAACGGAACGCCGAGGAAC 563 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117 ||||| | | ||||||||||||||| ||||||| |||||||| ||||| |||||| Sbjct 562 ATGTCGGCGCTGCGCTGGTACAGCTGGCAGGAGAGCTTGCCGTCGGCGACGTAGAACTGG 503 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAG 147177 | | ||||||||||| ||| ||||| || | ||| ||| |||||| ||||| Sbjct 502 AAGAAAGCGTGGCACGGCGCCAGGGCCATCTGCGGAATGTCGGCGACGTTCCACGCCGAA 443 Query 147178 ACCACCAGCCGCCTGCTCTCGGGGTT 147203 || | | ||||| |||||||| Sbjct 442 ACGATGATCCGCCGCGAATCGGGGTT 417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583385853132000