Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_026598.1 Length=58211 Score E Sequences producing significant alignments: (Bits) Value seq1130 84.2 8e-12 >seq1130 Length=54118 Score = 84.2 bits (92), Expect = 8e-12 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 23806 GCGCAGATCGGGCACGAGTCGGGCGGCCTGTACTACATGGAGGAAATCGCCGACGG-CAG 23864 || ||| | || |||||||| ||| ||||| || || || | || ||| ||| Sbjct 52944 GCCCAGGTGGGCCACGAGTCCGGCAGCCTGGTGTATGTGCGCGAGCTGGCGAGCGGGCAG 53003 Query 23865 CGCCTACGAGGGCCGCCTCGACCTGGGCAACACGCAGCCGGGCGACGGTAAGCGGTTCAA 23924 |||||||| || ||| ||||||||| || ||||||| |||||||| ||| ||||| Sbjct 53004 -GCCTACGAAGGTCGCGCCGACCTGGGAAATACGCAGCGTGGCGACGGCGTGCGCTTCAA 53062 Query 23925 GGGCCGCGGCCCTATCCAGATCACCGGCCGGTCGAACTAC 23964 |||||| |||| | ||| | |||||||| | |||||| Sbjct 53063 GGGCCGTGGCCTACTGCAGGTGACCGGCCGCGCCAACTAC 53102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186122640911130