Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_026600.1 Length=66181 Score E Sequences producing significant alignments: (Bits) Value seq60 89.7 2e-13 >seq60 Length=244765 Score = 89.7 bits (98), Expect = 2e-13 Identities = 108/147 (73%), Gaps = 9/147 (6%) Strand=Plus/Plus Query 12975 GAAATCGAATCGATGATCGTGGATGGAAGAGTGGTGGAAGCAAATCCGGCGCGGCAGCTC 13034 ||| | ||| || ||||||||||| | ||| | ||||| |||||||| | ||| Sbjct 233541 GAAGTTGAAGCGGTGATCGTGGATCGCGGAGCTTTCAAAGCAGGCGCGGCGCGGTAACTC 233600 Query 13035 CGGATGCCATACATGGAGGCG------GCCTGCCGGAAGCTGGACCTGGATGAAGCCCAG 13088 || ||||| ||||| ||||| |||| || ||||||||||| | |||||||| Sbjct 233601 AGGGTGCCAGACATGCAGGCGCTGGTTGCCTTCC---AGCTGGACCTGCACAAAGCCCAG 233657 Query 13089 GCCGTGCAGCGTGATTTTGTCCTTCAT 13115 ||||||||| ||||| ||||| |||| Sbjct 233658 GCCGTGCAGGGTGATCTTGTCGGTCAT 233684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211618273570310