Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_026606.1 Length=71200 Score E Sequences producing significant alignments: (Bits) Value seq1862 141 4e-29 >seq1862 Length=5913 Score = 141 bits (156), Expect = 4e-29 Identities = 245/356 (69%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 62724 ACATGGCCGGTGAAACCACCATAACGGTGATAGGCAATCTGACGAACGATCCCGAATTAC 62783 ||||||| || || |||| ||| || || || || || |||||| ||||| ||| | | Sbjct 5184 ACATGGCTGGCGACACCATCATCACCGTCATCGGAAACCTGACGGCTGATCCTGAACTTC 5243 Query 62784 GGTTCACGCCGTCCGGCAGCCCGGTGGCCAACTTCACCATTGCCAGCACCCCGCGCACGT 62843 | ||||| ||| | || | |||| || |||||||| |||| ||| || || || | Sbjct 5244 GTTTCACCCCGGCGGGTGCCGCGGTTGCAAACTTCACGGTTGCTTCCACGCCCCGTACCT 5303 Query 62844 TCGACCGGCAGAGCAACGAGTGGAAGGACGGGGAAACCCTGTTTTTGCGCGCGAGTATCT 62903 ||||||| | ||| || ||||| ||||| || | ||||| |||| | |||| Sbjct 5304 TCGACCGTAATTCCAATGAATGGAAAGACGGCGATGCGCTGTTCATGCGTTGCAACATCT 5363 Query 62904 GGCGCGACCCCGCGGAGAACGTGGCAGAGTCCCTGACCAAGGGCATGCGCGTGATTGTGT 62963 ||||||| | || |||||||| || ||| | ||||| || || || || ||| Sbjct 5364 GGCGCGAAGCAGCCGAGAACGTCGCGGAGAGCTTGACCCGTGGTTCACGAGTAATCGTGA 5423 Query 62964 CCGGGCGGCTCAAGTCCCGCAGCTACGAGACCAAGGAAGGCGAAAAGCGCACGGTCATTG 63023 ||| ||||||||| || ||||| || || ||||||||||| || ||| | | Sbjct 5424 GCGGCCGGCTCAAGCAGCGTTCGTACGAAACTCGCGAGGGCGAAAAGCGAACTGTCGTCG 5483 Query 63024 AGCTTGAGGTGGACGAAATTGGCCCGTCTTTGCGCTATGCCAACGCCAAGGTGAAC 63079 |||| || || || ||||| || || || || || |||| || ||||| ||| Sbjct 5484 AGCTCGAAGTCGATGAAATCGGTCCTTCACTGAAGTACGCCACGGCAAAGGTCAAC 5539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 227676332217605