Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_026610.2 Length=56637 Score E Sequences producing significant alignments: (Bits) Value seq1152 105 2e-18 >seq1152 Length=9820 Score = 105 bits (116), Expect = 2e-18 Identities = 178/255 (70%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 20528 CTGCTCAAAGTGTTCAAAGACGGGGCTGAGAAGTCTGACGAGATGGTGGTGGTCAAGGAT 20587 ||||| |||| ||| |||| || || || | | ||||| || | || || | Sbjct 4193 CTGCTGAAAGCCTTCGAAGATGGCGCGGAACAATACAACGAGCTGATCGTCGTGCGCGGC 4134 Query 20588 ATTCCATTCTTCTCCCATTGCGAACACCATATCGCACCGATCATTGGTCTGGCCACAGTA 20647 ||||| ||| ||||||||||||||| | |||||| || | || |||||| | Sbjct 4133 ATTCCCGTCTATAGCCATTGCGAACACCACCTGGCACCGTTCTTCGGCAAGGCCACCATC 4074 Query 20648 GCCTACATCCCGAACGGGAAGATCGTCGGCCTGTCCAAGATCACGCGCTTGGTCGATGCC 20707 | ||| | ||||| || ||||||||||||||||| || | |||||| | ||||| | Sbjct 4073 GGTTACGTGCCGAATGGCAAGATCGTCGGCCTGTCGAAACTGACGCGCCTCGTCGACTGC 4014 Query 20708 TTCGCCCGCCGCCTACAAGTGCAGGAGCGTTTGACCGAT-CAGATTGCGCAGACTATGGT 20766 ||| || ||||| ||||||||||| || ||| |||| ||||| || | | || | Sbjct 4013 TTCTCCAAGCGCCTGCAAGTGCAGGAACGCATGA-CGATGCAGATCGCCAATGCCCTGAT 3955 Query 20767 GGACGAGCTGGAGCC 20781 ||| | |||||| || Sbjct 3954 GGAGGTGCTGGAACC 3940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181086678578190