Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq7603 111 2e-19 seq160 86.0 8e-12 >seq7603 Length=749 Score = 111 bits (122), Expect = 2e-19 Identities = 187/271 (69%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 176356 TCAGTGTCGGCAAAGCCAACGGTTCGCGTTCAAGCTGTTCCTTCACCTGATCGAAGTGAT 176415 |||| |||||||| | || ||||||||| | ||||| || ||||||| |||| ||||| Sbjct 744 TCAGGGTCGGCAACGGCAGCGGTTCGCGGCCGAGCTGCTCGGTCACCTGGTCGACGTGAT 685 Query 176416 TGTTATAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGACTTCCAAGCCGCATT 176475 ||| ||||||||| || || | | | || | || ||||| || | ||| | Sbjct 684 TGTCGTAGATGTGGCAGTCGCCGCCGGTCCAGACGAACTCGCCGACGTCGAGTCCGGCCT 625 Query 176476 CCAGCGCGATCAGATGTGTCAGGAGTGCGTAAGAGGCGATGTTGAATGGAAGCCCCAAGA 176535 | | || |||| || || || || ||||| |||||||||||| |||| || | || Sbjct 624 GCTGGGCCATCATGTGGGTGAGCAGCGCGTAGCTGGCGATGTTGAACGGAACGCCGAGGA 565 Query 176536 AGACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTTCCCGTTGCGGACATAGAACT 176595 | | ||| || ||||| | | ||||||| || || |||| | ||| ||||||| Sbjct 564 ACATGTCGGCGCTGCGCTGGTACAGCTGGCAGGAGAGCTTGCCGTCGGCGACGTAGAACT 505 Query 176596 GGAAACCGTAGTGACACGGCGGCAAAGCCAT 176626 |||| ||| ||||||| || ||||| Sbjct 504 GGAAGAAAGCGTGGCACGGCGCCAGGGCCAT 474 >seq160 Length=487619 Score = 86.0 bits (94), Expect = 8e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 95625 AAATGTTGCGGGGTAGTAGCAGTGGTTAGCTCGTCTGCCTCATAAGCAGAAGGTCATCAG 95684 |||| |||||||| | |||||| | ||||||||| | ||||||| | |||||||||||| Sbjct 383268 AAATAGTGCGGGGTGG-AGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATCAG 383326 Query 95685 TTCGAATCTGATCCCCGCAACC 95706 ||||| |||| ||||||| ||| Sbjct 383327 TTCGAGTCTGGTCCCCGCTACC 383348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622806150907800