Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_027348.2 Length=73882 Score E Sequences producing significant alignments: (Bits) Value seq7603 127 1e-24 >seq7603 Length=749 Score = 127 bits (140), Expect = 1e-24 Identities = 139/182 (76%), Gaps = 7/182 (4%) Strand=Plus/Plus Query 21682 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 21741 |||| | || || ||||||||||| ||||||||||| ||||| || |||||||||||||| Sbjct 533 CTGCCAGCTGTACCAGCGCAGCGCCGACATGTTCCTCGGCGTTCCGTTCAACATCGCCAG 592 Query 21742 CTACGCGCTGCTGACGCACCTCATGGCGGCCA--CGGTCGGCATGCAGGCCGAGAAGTTC 21799 |||||||||||| || ||| | ||||| ||| || ||| | | | || ||||| Sbjct 593 CTACGCGCTGCTCACCCACATGATGGC--CCAGCAGGCCGGACTCGACGTCGGCGAGTTC 650 Query 21800 ATCTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGG---CCAAGCAG 21856 ||||| | ||||| ||||||||| | ||| || ||| | ||||||| || ||||| Sbjct 651 GTCTGGACCGGCGGCGACTGCCACATCTACGACAATCACGTCGACCAGGTGACCGAGCAG 710 Query 21857 CT 21858 || Sbjct 711 CT 712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236257267322615