Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_027384.1 Length=37359 Score E Sequences producing significant alignments: (Bits) Value seq523 464 1e-126 seq215 145 2e-30 seq9928 98.7 2e-16 >seq523 Length=83696 Score = 464 bits (514), Expect = 1e-126 Identities = 917/1341 (68%), Gaps = 37/1341 (3%) Strand=Plus/Plus Query 20580 GACCGCAACACCCCGCTTCAGGATGCCGAGGTCATCGGCGTGCCGGTAGCGGCCAATGTC 20639 || ||||| || || | |||| ||||||| | | || || || || || || ||| Sbjct 69569 GATCGCAATACGCCAATGAAGGACACCGAGGTGCTGGTGGTTCCTGTCGCCGCTAACGTC 69628 Query 20640 CAGGTCTTCGCCGGCGCCATCGTCGTGGCGAACGCTACCGGGTTCGCCGTAGGCGGCAGC 20699 | ||||||| ||| || | | || || | ||| || || || || | | ||| Sbjct 69629 CGCATCTTCGCGGGCTCCCTGGCGGTTGCCACCGCCACTGGCTTTGCTGCACCCGGTTCA 69688 Query 20700 ACCGCCACCGGCTTGACCTACCTGGGCCGCGCTGAGGAATACGTGGACAACCGCAATGGC 20759 |||||| |||||| ||||||||||||| |||| || || |||||||| ||| Sbjct 69689 ACCGCCCTGGGCTTGTCCTACCTGGGCCGTTTCGAGGCATCAGTCGACAACCGAGGGGGC 69748 Query 20760 GCGGACGGCGC---CAAGGTCGTCCGCG-TGCGCCGCCTGAACGCCTTCAAGTGGGCGAA 20815 || | || || | ||| ||| | | |||| || || ||| ||||| || Sbjct 69749 GCCGCTGGTGCTGCCCAGG----CCGAGATCCGCCATGGCAAGGCATTCCTTTGGGCCAA 69804 Query 20816 CGACGGCAGCGTCACCCAGGCGCACCTGATGAAACCCGCCTACATCGTGGACGACCAGAC 20875 ||||| | | |||| |||||||||||| | || || ||||||||||| || ||| | || Sbjct 69805 TGACGGAACCATCACTCAGGCGCACCTGTTCAAGCCAGCCTACATCGTTGATGACGAAAC 69864 Query 20876 CGTCGCCGCCACGGACGGCACCGAAACCCGCTCCCCGGCCGGCCGCATCATCGGCGTCGA 20935 |||||| || | || | || ||||| ||| | ||||| |||||| |||| | || Sbjct 69865 CGTCGCGGCTGCTGATGCAGGCGGCACCCGATCCGCTGCCGGACGCATCGTCGGTATTGA 69924 Query 20936 ACCGGACGGCGTGTGGGTGGAATAACAGGCTCACCAAC--GGAGAACCGGACACATGCTG 20993 | ||||||| ||||| || |||| ||| | |||| | | |||| || Sbjct 69925 TACCAACGGCGTTTGGGTTGAGTAACTCCCTCTATATATAGGAGCGCATTGCGCATGTTG 69984 Query 20994 ATCAATAAGCAGAGTCT-CAGCGCGGCATTCGTCGCGATCAAAACCATCTTCAACAACGC 21052 | || ||| | | ||| || || ||||| || | |||||| | ||||| ||||| Sbjct 69985 GTTAACAAGTCCTCTATTCAG-GCAGCTTTCGTTGCTCTGAAAACCCTTTTCAATAACGC 70043 Query 21053 CTTCGGGGCAGCCCCCACCACCTGGCAGAAGATCGCCATGGAAGTGCCGAGTAACACCGG 21112 ||| ||| | || |||| | | ||| | |||||||||||| | ||||| || | ||| || Sbjct 70044 CTTTGGGTCTGCACCCAGCTCTTGGGAAAAGATCGCCATGAAGGTGCCAAGCACCACTGG 70103 Query 21113 CAGCAACGATTACAAGTGGCTGAGCGCCTTTCCGAAGATGCGCCGCTGGATCGGCGCGAA 21172 ||||||| || |||||| || ||||||||||||||||| ||| | || ||||| Sbjct 70104 CAGCAACATGTATGCCTGGCTGTCGGCGTTTCCGAAGATGCGCCGTTGGGTTGGTGCGAA 70163 Query 21173 GGTGGTCAAAAACCTGAAGGCCTACAAATACGTTGTCGAGAACGAGGACTTCGAGGCCAC 21232 || || ||||| || || | || ||| || || ||||| ||||| || || || Sbjct 70164 ACACGTTAAGAACCTCAAAGCGTTCAGCTACACCGTGGAAAACGAAGACTTTGAAGCGAC 70223 Query 21233 CGTCGAGGTGGACCGCAACGACATCGAGGACGACCAGCTCGGCATCTACTCGCCTCAGGC 21292 ||||| || ||||| ||| ||||||| ||||| ||| | ||||| || |||| ||||| Sbjct 70224 TGTCGAAGTAGACCGTAACCACATCGAAGACGATCAGTTGGGCATTTATGCGCCCCAGGC 70283 Query 21293 GCAGATGGCCGGTTTCTCGGCGGCGCAGCTCCCGGACGAACTGGTCTACGAAGCGGTCAA 21352 ||||||||| || || ||||| || | | ||||| ||| | || | ||| ||| || Sbjct 70284 GCAGATGGCTGGCTTTTCGGCAAAGCGGTTGCCGGATGAAATCGTATTCGAGCTGGTGAA 70343 Query 21353 CGGTGCCTTCACGAAGCTCTGTTTCGACGGCCAGTATTTCATCGACACCGACCACCCTGT 21412 ||||| ||| || || || | |||||| ||||||||| | || || ||||| || Sbjct 70344 CGGTGGCTTTGGCAACCTGTGCTACGACGGTCAGTATTTCTTTGATACAGACCATGTCGT 70403 Query 21413 CGGTGATGCCTCGGTGAGCAACAAGGGCACCGCTCCGCTTTCCAACGCCAACCAGGCGGC 21472 |||| || | || |||||||| ||||| || | || |||| | | | |||||| || Sbjct 70404 CGGTAGTGGCAGCGTCAGCAACAAAGGCACTGCGGCACTCTCCATCACGACCCAGGCAGC 70463 Query 21473 GGCGAAGGCAGGTTATGGCGCTGCTCGCACTGCGATGAAGAAGTTCAAGGACGAGGAAGG 21532 || ||||| |||||||||| || || || || ||| |||||||||||||| || || Sbjct 70464 AGCCAAGGCCAGTTATGGCGCGGCACGTACCGCCATGGGCAAGTTCAAGGACGATGACGG 70523 Query 21533 GCGTTCCCTCAACGTCTCCCCCAAC-GTGCTCCTGGTCGGCCCGGCGCTGGAAGACGTGG 21591 || | || | || | ||||| | ||||||||||| || | ||||||||| | Sbjct 70524 CCGCCCGCTGGATGT-GCGTCCAACAATCCTCCTGGTCGGGCCTGGCCTGGAAGACACCG 70582 Query 21592 CGAAGATGCTGCTCACCAACCCGAAGCTCGC--GGACAACACCCCG---AACCCCTACGT 21646 | | || || ||| | | |||| ||| || | | |||| |||| Sbjct 70583 C----ACGCGCCTTGTTGACCAG-TGATCGCCTGGAAGACGGCAAGGTCAACCTCTACAA 70637 Query 21647 CGGCACTGCTGAGCTGGTAG--TGGACGGGCGTATCGAGTCCGACACCGCCTGGTTCCTG 21704 ||||| || |||||||| | | ||| || ||| |||||||| |||||||| || Sbjct 70638 GGGCACCGCCGAGCTGGTTGTCTCGAC--TCGCATCACTTCCGACACGGCCTGGTTTCTT 70695 Query 21705 CTGGACACCACCAAGCCGGTAAAACCGTTCATCTACCAGCCCAGGAAGAAGCCGGTATTC 21764 |||||||||| |||||| || || |||||||| ||| | || ||||| ||| Sbjct 70696 CTGGACACCAGCAAGCCCGTGCGCCCCTTCATCTATCAGGAGCGCAAAGCCCCGGTCTTC 70755 Query 21765 GTTTCCCAGGTCAACCTGGATTCGGATGACGTCTTCAACCTGCGCAAG---CTGAAGTTC 21821 || ||| | ||| || | ||||| ||||||| | |||||| | |||||| Sbjct 70756 GTCCAGCAGACCGACCCCGAAGCTGATGATGTCTTCAGC---CGCAAGAAATTCAAGTTC 70812 Query 21822 GGCGCCGAGGCCCGCGCTGCTGCCGGTTACGGCTTCTGGCAGCTGGCCTACGGCTCCACC 21881 || || || || || || |||| ||||| || |||||||| ||||| | |||||| || Sbjct 70813 GGGGCAGAAGCGCGAGCGGCTGGTGGTTATGGTTTCTGGCAACTGGCTTTCGGCTCGACT 70872 Query 21882 GGCACTGGCGCATAAGGGGGC 21902 ||| | || ||||||||| Sbjct 70873 GGC---GAAGCGTAAGGGGGC 70890 Score = 286 bits (316), Expect = 8e-73 Identities = 558/814 (69%), Gaps = 28/814 (3%) Strand=Plus/Plus Query 1189 GCTATGTTTATGCCCTAAGTCACGTTAGACACCCCaaaaaaaCCACCCTGCACGGTGGTT 1248 ||||||||||||||||| || |||||||||| ||||||||| ||||||| |||||||| Sbjct 49468 GCTATGTTTATGCCCTAGGTAACGTTAGACATCCCAAAAAA-CCACCCTTGCCGGTGGTT 49526 Query 1249 GAGATGGAACG-TAGGCATGAACAGAACCGAAATACCCCGCGACAACAACGTCCGCTGGG 1307 || | ||| |||||||||||| ||||||||| || | ||| | | | || |||| Sbjct 49527 ATGAATGGACGCTAGGCATGAACAAAACCGAAATCCCGCTTGACCCAACCCTGCGATGGG 49586 Query 1308 AGTGGATCAAATACCAGCTCCGCGCCAGGGGTTCGTCCCTGGCCGAGGTGGCCCGCTCCC 1367 | |||||||||||||| || || || | ||| |||| || || |||| || | Sbjct 49587 AATGGATCAAATACCAACTTCGTACCCGAGGTACGTCACTCGCAATCTTGGCGCGTGAAC 49646 Query 1368 TCGACGTATCCAGCC-CGGCAGTCAAAAACGCCAAGCTGAATCCCTATCCTCGGGTAGAG 1426 | ||||| | ||| | || ||||| ||||| |||| | | ||||| || | ||| Sbjct 49647 TTGACGT-TACAGATGCTGCCGTCAAGAACGCTAAGCGCACCGCATATCCGCGAATGGAG 49705 Query 1427 CGCGCCATCGCCGCTGTGCTCGACCTCAGCCCCCTGGTGCTGTGGCCTGAGCGCTGGCTC 1486 || || || ||| || ||| | ||||| || | | ||||||| || || ||| | Sbjct 49706 CGAGCTATTGCCCGTGCGCTAGGCCTCAAGCCAATCGACTTGTGGCCCGAACGTTGGAAC 49765 Query 1487 GACGACGAGAATCCGAAGCGGCAACGGCCCAATCGTTCGGAAACCCTCAAGGCATATGAC 1546 | ||| | || | || ||| | || | ||| | ||| ||| | Sbjct 49766 GCAAACGGCACCCCACACCGTATTCGGGTGCAGCGCGCAGAA---CACAACGCAACT--- 49819 Query 1547 AGTGTCATATGCCGATCCGGGAAAAATAACAGATACGCTGA--CCAAGCG-CAGCGTAAA 1603 || || ||| | | ||||| | ||| | || || || |||||| Sbjct 49820 ----TC-TA-GCCAAG------AGCATAACCCA---GCTTATGCCCTTCGACACCGTAAA 49864 Query 1604 GCCGACGCGGGGGCTTGAACATGGCCCGCCGCAAAGACGACCGCACCCTGGACATCTTCG 1663 ||| | ||| || | |||||| ||| || || || || || | ||||||||| Sbjct 49865 ACCGGCACGGAGGTATAAACATGCGCCGTGTAAAGGATGATCGTACGTTAGACATCTTCT 49924 Query 1664 ATGTTCCGCAGCCAGCTCGCGCTATACCCGGTGAGTGCAACTACGCCGCCCAGGTCAGTG 1723 ||| || ||||||| || ||||| || || | ||||| | ||||| |||||||||| Sbjct 49925 CTGTCCCACAGCCAGTTCTGGCTATCCCAGGGAATGGCAACAATGCCGCACAGGTCAGTG 49984 Query 1724 AGCTGGTCAGCGAAATACTGAAGGCCGCCAACCTCGACCGTTACGAGATTGCCGCCCGCA 1783 | ||| ||||||| || ||||| | || | || ||||||||||| |||| || |||| Sbjct 49985 AACTGATCAGCGAGATTCTGAAAGGTTCCGATCTGGACCGTTACGAAATTGGTGCACGCA 50044 Query 1784 TGTCGCGCCTCTCCGGCGATGACGTGAGCAAGAACATGCTCGACGCCTGGTCGAGTCCCG 1843 |||| ||| | || |||||||||||||| ||| ||||||| ||||| |||||||| || | Sbjct 50045 TGTCTCGCTTGTCTGGCGATGACGTGAGTAAGCACATGCTTGACGCGTGGTCGAGCCCAG 50104 Query 1844 CCCGAGTTGATCACAACTTGCCTTTCTACCGCGCCGCCCTCCTGGAGGACGTCTGCGCGA 1903 ||||| || || ||| |||| ||||| | ||| | || || || || || || | Sbjct 50105 CCCGAACAGACCATAACCTGCCGTTCTATAGAGCCCCACTGCTTGAAGAAGTTTGTAGCA 50164 Query 1904 GCCACCTGCTGACCAACTGGCTGGTCGATGTGCGGGGCGGCCGCGTGGCCTATGGCCGAG 1963 | ||| | | ||| |||||||||| || || || ||||||||||| || || || | Sbjct 50165 GTCACGTTTTAACCGACTGGCTGGTTGAGCAACGTGGTGGCCGCGTGGCTTACGGTCGCG 50224 Query 1964 ACGCACTGCTCGCCGAACTGGGCCGCCTGGAGCG 1997 | ||||| ||| || || || || |||| ||| Sbjct 50225 ATGCACTCAACGCGGAGCTTGGTCGTCTGGCGCG 50258 Score = 129 bits (142), Expect = 1e-25 Identities = 286/420 (68%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 389 ATCCAGCGCCCTGACCAAACAACGCGTCCGATGATGTCGACGGCGTGCAAGTCTTGCTTA 448 ||||| | || | ||| || ||||| || || || || | | ||| ||| | | | | Sbjct 48650 ATCCAACCGCCAGCCCATACTACGCGGCCAATTATCTCCAGGTCGTTCAACTTATCCCTG 48709 Query 449 GACACGAACATTGTCTGATAGGCCGGGTTAGCACTGATGATCGCGAG--GCCGCCATTGA 506 | || | ||| | |||||| ||| |||||||||| | || | | || | || Sbjct 48710 GGGACAACCATATCGCGGTAGGCCTTGTTCTCACTGATGAT-GTGAATAGAC-CCGTCGA 48767 Query 507 TCTGCCGTTGGACGCGCTTGGCGTACAAGTGGTCATCCAGGCGGATGACGTAGACAGCTT 566 |||||| |||| | || || || | ||||||||||| ||||||||||| ||||| | Sbjct 48768 ACTGCCGCTGGAGCCTTTTCGCATAGAGATGGTCATCCAGCCGGATGACGTATACAGCCT 48827 Query 567 CGTCACGAACCTCATTGCAACTGTGGTCAATCATCACCGTATCGCCATCGCTCAACAGTG 626 | | || | ||| ||||||||||||||||| |||||||||||||| | ||| Sbjct 48828 CTCCCTCAAGCGAGCTGCGGCTGTGGTCAATCATCACAGTATCGCCATCGCTTAGAAGTC 48887 Query 627 GCTCCATTGAGTCACCGCCGATGCGGACGGCCGACATATTCGCGATCTCCAGGCCTTGCT 686 |||||| || || ||| | | |||| || |||| ||| ||||||||||||| Sbjct 48888 CCTCCATCGAATCCCCGTCCACTCGGATTGCGGACAGTCGCGCAGAGTCCAGGCCTTGCT 48947 Query 687 TCCGCAAGC-TGTA-GCGAGTGAATGCCAACTGAGCGAGTATCCGCGCCCCCTCTGTCCA 744 | || |||| ||| ||| ||||| || | ||| | || | ||||| || |||| Sbjct 48948 TGCG-AAGCGAGTACGCG-GTGAACGCAAGCTGGGTTAGGACAGTAGCCCCTTCGCTCCA 49005 Query 745 GGAGCCGTGACCAGCGCTCACCCGAGCGTCATACAGAGGGATATAGGCGTAATTTTCGTC 804 || |||||| || || || | ||||| |||| ||| | || ||||| || || || Sbjct 49006 GGCGCCGTGTCCCGCACTACAGTGGGCGTCGTACAAAGGCACGTAAGCGTACTTGTCCTC 49065 Score = 125 bits (138), Expect = 2e-24 Identities = 118/147 (80%), Gaps = 5/147 (3%) Strand=Plus/Plus Query 9241 AGCGAAACCGCCCCGGCCTGGCCGGGACGGTCTGCCGGACGTGGTGGTCCGGTACTGATG 9300 ||||||| ||||||||| | | ||| |||||||||||||||||| |||||||||||||| Sbjct 56894 AGCGAAATCGCCCCGGCGCG-CTGGGGCGGTCTGCCGGACGTGGTTGTCCGGTACTGATG 56952 Query 9301 AGCAGCCACCCATGACGAACGAA--ACCAAGACAGACCGCCAGCGCCGCCTGGCGCGGGA 9358 |||||||||||||||| ||||| ||| | |||| ||| | ||||||||| | || Sbjct 56953 AGCAGCCACCCATGACAGACGAAACACCCAAACAG--CGCAAAACCCGCCTGGCATGCGA 57010 Query 9359 ACGCCAACGGGCGAAGCGCGAGCGCGA 9385 || |||| || ||||| ||||||| Sbjct 57011 GCGTAAACGTGCCCAGCGCAAGCGCGA 57037 Score = 118 bits (130), Expect = 3e-22 Identities = 219/321 (68%), Gaps = 9/321 (3%) Strand=Plus/Plus Query 9632 AAAATCCACATCGCCAAGACCCAGCTGGGCATGGACGATGACACCTATCGCGCATTGCTC 9691 || |||||||||||||||| | || || |||| || || ||||| || || ||| | Sbjct 57266 AAGATCCACATCGCCAAGAAGGACCTTGGGCTGGATGACGAAACCTACCGGGCCTTGTTG 57325 Query 9692 GCTCGCGTCGCGGGCGTGCGCTCGGCCAAGGACTTAGGGCCGCGCCAGGTTGACCAGGTA 9751 | ||||| ||||| ||||| |||||||| ||| | ||| |||||| | | | ||| Sbjct 57326 GGCCGCGTGGCGGGTGTGCGTTCGGCCAAAGACCTGACGCCACGCCAGATCGGCGCTGTA 57385 Query 9752 CTGGTCGAACTCCAGCGTCTGGGCTGG------AAACCGAAGAGCAACCGGCAAGGCCGG 9805 |||| ||| | || |||||||| ||||||| | || ||||||||| Sbjct 57386 CTGGCCGAGTTTGCCCGCTTGGGCTGGGAGTCTAAACCGACTAAAAA---GCAAGGCCGC 57442 Query 9806 GCGACGCCAAAAGTGCCGCAAAACCGGCAAACCGTGCTGCGCAAAATCACCGCGCTCCTG 9865 | || | | | ||| | ||||| || || || | ||||| || | || Sbjct 57443 AAGGGACCGATGGCGGCGCCAGACCGGGTAAAGCTGGTGGGTAAAATAGAGGCTTTTCTC 57502 Query 9866 GCCAGCGCCCATCGCCCCTGGAGCTACGCCGACCATATGGCCCGGCGCATGTTCCAGGTC 9925 ||| ||| | ||| ||||| || |||||| |||||||| |||||||||| ||||| Sbjct 57503 GCCGAGGCCAAACGCTCCTGGGCATATGCCGACGGTATGGCCCTGCGCATGTTCAAGGTC 57562 Query 9926 GAGCGGGTCGAGTGGCTGGAC 9946 ||||| || || ||||| ||| Sbjct 57563 GAGCGAGTGGAATGGCTAGAC 57583 Score = 98.7 bits (108), Expect = 2e-16 Identities = 349/536 (65%), Gaps = 16/536 (3%) Strand=Plus/Plus Query 4448 GTTGCCCGGCCTGGTCTGCTTCTACGGCCCGTCCGGCTTCGGCAAATCCGTTTCGGCCGC 4507 |||||| |||||||| | |||||| | |||| | |||||| |||| || || Sbjct 52459 GTTGCCTGGCCTGGTAGTGATGTACGGCGCAAGCGGCCTTGGCAAAAGCGTTGGCGCTGC 52518 Query 4508 CTGGGTCGCCAATCGCCGCCGCGCCTACTACGTCCAG-GCCAAAAGCGTCTGGACCCGCA 4566 || | ||| || | | ||| ||||| ||||| || ||| | | ||||| | Sbjct 52519 CTTCGCCGCAAACCAGCACCGTGCCTATTACGTGGAGTGCCGCGA-CACCTGGAGTAAAA 52577 Query 4567 AGCACACGCTGAAGTCGATCCTGGGTGAAATGGGCATCAAGCCGGCCGGGACCATCCCGG 4626 || ||| | | ||||| | || ||| ||||| | |||||| |||||| ||| Sbjct 52578 AGGCTTTCCTGCACGCCATCCTTCGCGAGATGAGCATCCAACCGGCCCCGACCATGTCGG 52637 Query 4627 AAATGGCCGACCAGATCGCCGAGGAACTGGCCGCCAGCGGCCGCCCGCTGATCATCGACG 4686 |||| |||||||||||| ||| | || || ||||| ||||||||| | ||||||| Sbjct 52638 TGATGGTCGACCAGATCGCTGAGCAGTTGTCCAAGAGCGGGCGCCCGCTGTTGATCGACG 52697 Query 4687 AAATGGACCACCTGGTC------GCCGCTGGCCAGGTCGAGCTGATTCGTGATCTGTACG 4740 | || | ||||| || |||| | |||| || |||| || ||| ||| Sbjct 52698 ACGTGCAATACCTGCTCGAAAAAGCCG-TAGCCA--ACGTCCTGA-CCGACATC--TACA 52751 Query 4741 AGTCCAGCCAAGCCTCCATCTTGCTGATCGGCGAGGAAATGCTGCCGACCAAGCTGAAGA 4800 | ||||| ||| |||| | ||||||||||| ||| |||| | ||| || Sbjct 52752 ACGCCAGCGAAGGGACCATTGTCCTGATCGGCGAAGAACGTGTGCCCGGTAGCCTGGCGA 52811 Query 4801 AGTTCGAACGCTTCCATGGCCGCGTTCTGAGCTGGGTTCCGGCCCAGCCAGTGTCCCTGG 4860 || | |||||| | ||| ||| || ||| ||||| || || |||| | |||||| Sbjct 52812 AGCTGGAACGCCTGCATAACCGGGTGCTGGAGTGGGTACCTGCGCAGCGCGCCACCCTGG 52871 Query 4861 AGGACGCCCGCAACCTGGCGCCGGTCTACAGCCCCGGAGTGGC-TATCGCTGACGATCTG 4919 | || ||| |||||| | ||| | |||||| | || ||||||| ||| || Sbjct 52872 ACGATCTGCGCGCCCTGGC-CGAGTCAAGCTACCCGGAATTGCACTTCGCTGATGATTTG 52930 Query 4920 CTCGCGCACCTGGTGAAGAAGTCCCTGGGCTCTGTCCGTCGCGTCGCGGTGAACCT 4975 || | ||||| |||||| |||| | ||||| || ||||| ||||| Sbjct 52931 CTGGATGACCTGCGCAAGAAGGTGAATGGCTGCCTGCGTCGTGTAGCGGTCAACCT 52986 Score = 91.5 bits (100), Expect = 4e-14 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 6606 CGCCTGTCTTCGTCCAGCTGCTCGCCGCCGAGGTGGCCCGCAGCAGCCAGACGAAAGCCG 6665 |||| | ||||| | |||||||||||||| || || || || | |||| || ||| Sbjct 53747 CGCCGTTGTTCGTACGCCTGCTCGCCGCCGAAGTCGCTGCCACCAACAAGACCAAGGCCA 53806 Query 6666 GCGAGGCAATCGGCATGAGCCGTTCGACCGTCAGCACCATCCTCGCCAACCGCTACCCGT 6725 || || |||||||||||||| || |||||||| | ||| |||||||||| ||| Sbjct 53807 GCCAGCGTATCGGCATGAGCCGCACGGCCGTCAGCCTGACCCTTTCCAACCGCTATGCGT 53866 Query 6726 CGCCCTCGACGATCCGCGTCGAGCGCCGCGTCCTGGCCGCGCTGAGCCGTATTGAGTGCC 6785 ||||| | | | || ||||| || || ||| | ||| | || ||||| || Sbjct 53867 CGCCCAGCATGGCGGGTGTTGAGCGGCGGGTAATGGAAACCCTGGGGCGCATTGAATGTG 53926 Query 6786 CGGCCTTGGGCGAGGCGGTGACCTCGGTCGAGTGC 6820 ||| ||| |||| | || ||| ||| | ||||| Sbjct 53927 TCGCCCTGGACGAGACCGTTACCACGGACCAGTGC 53961 >seq215 Length=48791 Score = 145 bits (160), Expect = 2e-30 Identities = 131/162 (81%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 26120 CGATGCAGGAAGCGACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAGCTGG 26179 ||||||||||||| |||||||||||||| || || |||||||||||||||||||||| Sbjct 24376 CGATGCAGGAAGCCACCGGCAAGGCTGTGAGCGAGACTGTCGCCGAGTTCTCCAAGCTGG 24435 Query 26180 CCGACGAACCAGTCAAAGCCTC-GCAACAGCTCAACGAGAAATATCACTACCTGACCGCC 26238 | ||||| || || || ||||| || | ||| |||||| | || ||||| ||||| || Sbjct 24436 CAGACGACCCGGTAAAGGCCTCTGCTGC-GCTGAACGAGCAGTACCACTATCTGACGGCT 24494 Query 26239 TCGGTTTACGAGCAGATAGCCGCCCTCGATCAACAAGGCGAT 26280 ||||||||| |||||| ||||| || || || || |||||| Sbjct 24495 TCGGTTTACTCGCAGATTGCCGCACTGGAGCAGCAGGGCGAT 24536 Score = 125 bits (138), Expect = 2e-24 Identities = 465/720 (65%), Gaps = 18/720 (3%) Strand=Plus/Plus Query 27067 GACCAGGTCACCGCAGCCTATGAGGGGGAAATCCAGGCGCTGGAGGCGCTGCGCGACAAA 27126 ||| |||| |||||||||||||||| || || ||||||||||| | | ||| Sbjct 25257 GACGAGGTGACCGCAGCCTATGAGGCCGAGATTGCCGCGCTGGAGGCCGTCAAAGGCAAG 25316 Query 27127 AGTTCCACCACGGCGGCCCAGCGCATCAGCCTGGACCAGAAGATCGCCGAGGCCAGGAAC 27186 | ||||| || || |||||| ||||| |||||||||||||||| || || | Sbjct 25317 AAGTCCACGACTGCTGCCCAGAGCATCCAGTTGGACCAGAAGATCGCTGACGCGCGCGCA 25376 Query 27187 AACATGGTCAAGGCGCAGAAGAAGGCCGACGCTGACCTGGAAGTCCT--CCAGCTCAACG 27244 ||||||||||||||||| |||||||| | || || || | ||| ||||| Sbjct 25377 GGGATGGTCAAGGCGCAGAAAGAGGCCGACAACCAGCTTGAGGTGTTGGCCA--CCAACG 25434 Query 27245 AACAGGGGCGCCTGAAGAAGCAGGCCCAGGCGGTCAAGGCCTACAGCGATGCGCTCCAGC 27304 | || |||||| ||||||| | | | ||| ||||| | || || | Sbjct 25435 AGACCGGACGCCTGGCCAAGCAGGAACGGTCAATCACCACCTACGTGCAGGCCCTGGCTC 25494 Query 27305 AACAACAGGATGCGCTGGCCCTCCAAGGTCAACGTGCCGCCGCTGCCGTGGGCATGGGCG 27364 | |||||| || |||| || || ||||| || | || ||||||| ||| | Sbjct 25495 AGCAACAGCGAGCCCTGGAACTTGCCGGCCAACGCGCAGTACTTGGCGTGGGCCAGGGGG 25554 Query 27365 --CGCAACAGCGCCGCCTGTTCGATCAGCGTGGCAGCCTTGACGACCGATTCGCGCAGCA 27422 ||| | | ||| || || | | ||||| | ||||| || || ||||| Sbjct 25555 ACCGCCAGAACGC--ACTCAACGGCGAACTGAACAGCCAGCAAGACCGGTTTGCTCAGCA 25612 Query 27423 GCGCCTGGACCTGGCGAGCCAGTACGGTGACGGCTCGCGAGGCATGAGCCTCGACGAGTA 27482 | ||||| |||| | |||| | ||| ||||| |||| || |||| Sbjct 25613 GTCGCTGGAGTTGGCCAACCAGAAATCCGACCCGTCGCGCAACATGTCGGAGGAGGAGTT 25672 Query 27483 CAA-CGACAAGCTCAAGGCGCT---GGAAGCTAACCATGCCGCGA-TGACCCAGCAGCTG 27537 ||| ||| || | | ||||||| || || ||| | ||||| | |||| ||| | Sbjct 25673 CAAGCGAAAATC-CCAGGCGCTTGCAGATGCGAACAAGGCCGCCACTGAC----CAGATC 25727 Query 27538 CAACGCAACTACGCCGATCTCCAGGCCGCCCAGGGCAACTGGGTCAACGGGGCGACGTCG 27597 | | ||||| || ||| | || ||| |||||| ||||| || || ||||||||| Sbjct 25728 CGGCAGAACTATGCGGATGTGGAGAACGCACAGGGCGACTGGACGAAGGGCGCGACGTCG 25787 Query 27598 GCGTTCGCTGACTACATCGACTCCGCCAGAGACGTTGCGGGCCAGACCTACGAACTGTTT 27657 || | || ||||| | || || || | || |||| ||||||||| | ||||| Sbjct 25788 GCCTGGGCCAACTACCTGGATTCGGCGAAGAACATTGCCGGCCAGACCAAAAGCCTGTTC 25847 Query 27658 AGTAACGCCTTCTCCGGTCTGGAGGATGCCGTCGTTACCTTTGTGACGACTGGCAAGGCC 27717 | || |||||| | | ||||||| || || || | ||| | | ||| |||||||| Sbjct 25848 GGCAATGCCTTCAGCAGCATGGAGGACGCGGTAGTCAACTTCGCAATGACCGGCAAGGCA 25907 Query 27718 TCGCTGGATGACTTCGTCCGCACCATGATTGGCGACCTGGCCAGGATGGCGACCCGCCAG 27777 ||| | ||||||| | || ||| ||| ||||| | || || ||||||||| Sbjct 25908 TCGTTCTCGGACTTCGCTAAATCGATCCTTGCAGACATGGCCCGCATTGCTACCCGCCAG 25967 >seq9928 Length=455 Score = 98.7 bits (108), Expect = 2e-16 Identities = 244/365 (67%), Gaps = 4/365 (1%) Strand=Plus/Plus Query 13742 CGCCGCCAGATCGAGGCCGAGGTCGCAGGTTTCGACCCCGACC-CGAAGGCCAGCGCCGC 13800 ||||||| | |||||||||| || || |||| |||||| || || | | | | Sbjct 86 CGCCGCCTGGTCGAGGCCGAATGCGATGGCTTCGCGACCGACCACGCAGCGC-GTGACCA 144 Query 13801 CCGGCGTGAACGGGC-CAGCGCGGACTATGAGTATTTCGCCCGGACCTACTTCCCGCACT 13859 || ||| ||||| ||| || |||| |||| ||| || ||||| ||||| |||| Sbjct 145 GCGCCGTACCCGGGCGCAGACCG-ACTACGAGTTCTTCTGTCGCACCTATTTCCCTCACT 203 Query 13860 ACGTGAAGCGCGGTAACGCGCTGCTCCACGACTACCTCTACAAGCGGTTGCCCGAGCTGG 13919 |||||||| ||| ||||| |||| || ||||| | |||||| |||| Sbjct 204 ACGTGAAGAGCGAGGCATCGCTGTTCCATCGCTGGTTCTACGACACCGTGCCCGGCCTGG 263 Query 13920 TGGACCACCCGGACGGCCAGCACGAAGCCATTGCGGCACCGCGTGGTAATGCCAAGTCCA 13979 | || || || || |||| | | || |||| || |||||| | || ||||||| Sbjct 264 TCGATCAACCCACGGGGCAGCTCATCGAGATCTCGGCCCCACGTGGTGAGGCGAAGTCCA 323 Query 13980 CCCTAGTGAGCCAAATATTCGTGATCTGGTGCGTACTCACCGGCCGCAAGCATTACCCCC 14039 |||| | | || | ||| | | ||||| || | |||| ||||||| | | | Sbjct 324 CCCTCGGTACGCAGCTCTTCACGCTTTGGTGTGTGGTGACCGAGCGCAAGCGATTCATTC 383 Query 14040 TGATCATCATGGATGCCTTCGAACAGGCCGCCACGATGTTGGAGGCGATCAAGGCGGAGC 14099 | | | ||||| |||||| |||||||| || ||| ||||||| |||||| |||| Sbjct 384 CGCTGGTGATGGACAGCTTCGACCAGGCCGCGACCATGCTGGAGGCCGTCAAGGTCGAGC 443 Query 14100 TGGAG 14104 ||||| Sbjct 444 TGGAG 448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119407338137010