Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_028653.1 Length=67617 Score E Sequences producing significant alignments: (Bits) Value seq2405 84.2 9e-12 >seq2405 Length=2039 Score = 84.2 bits (92), Expect = 9e-12 Identities = 146/211 (69%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 40892 GGGTCGATGAACCGCTCGAACTGCATGAGCGGGAACTCCATCGGGTCGACCTCGGTGATG 40951 |||| || ||| ||||||||| ||| | | || || ||||||| | |||||| Sbjct 802 GGGTTGAGGAATCGCTCGAACAGCAA---CCCGTACGGGATGGGGTCGATGTTGGTGATA 858 Query 40952 CGCAGCAGGAAGCAGACCAGCGACCCGGCAGCCGACCCGCGGCCGGGACCGACCCCCATC 41011 | || | | || |||| ||| ||||||||||| || |||||||| ||||| | | Sbjct 859 CCCATCGCGTAGGCCACCAACGAACCGGCAGCCGATCCACGGCCGGGCCCGACACGGA-- 916 Query 41012 TTCGCGACGTCCTTGGCCCACCGGACCAGGTCCGCGGTGACCAGGAAGTAGTCGCAGAAC 41071 || ||||||||||||| || |||||| || || ||||||||| | ||| Sbjct 917 -TCCCGACGTCCTTGGCGTGGTTGATCAGGTCGCCGACCACGAGGAAGTAGGCCGGGAAG 975 Query 41072 CCCTTCTCGTCGAGCATCCCGAACTCGTAGT 41102 ||| | |||| || | |||| |||||||| Sbjct 976 CCCATTTCGTTGATGACGCCGATCTCGTAGT 1006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 216212689234290