Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_028676.1 Length=149218 Score E Sequences producing significant alignments: (Bits) Value seq7603 129 6e-25 seq6140 87.8 2e-12 >seq7603 Length=749 Score = 129 bits (142), Expect = 6e-25 Identities = 217/307 (71%), Gaps = 8/307 (3%) Strand=Plus/Minus Query 119658 CGGAAGAGGTTCACGTTCGAGCTGCTCTTTCACCTGGTCGAAGTGATTGAGGTAGATGTG 119717 ||| || ||||| || |||||||||| |||||||||||| ||||||| ||||||||| Sbjct 731 CGGCAGCGGTTCGCGGCCGAGCTGCTCGGTCACCTGGTCGACGTGATTGTCGTAGATGTG 672 Query 119718 CGTGTCTCCGAAGCTGCCGATCAGTTCGCCGACTTCGAG-ATTGCATTCTCGAGCAATGA 119776 ||| ||| | | | || | |||||||| ||||| || | || | || || | Sbjct 671 GCAGTCGCCGCCGGTCCAGACGAACTCGCCGACGTCGAGTCCGGCCTGCT-GGGCCATCA 613 Query 119777 TGTGAGTCAGAAGAGCGTACGACGCGATGTTGAACGGAAGACCGAGGAACACATCGACTG 119836 |||| || || || ||||| |||||||||||||||| |||||||||| ||| | Sbjct 612 TGTGGGTGAGCAGCGCGTAGCTGGCGATGTTGAACGGAACGCCGAGGAACATGTCGGCGC 553 Query 119837 ACCTCTGGTTCCAGAT-GCACGAGAGCTTCTTGTTTCGTACGTAGAACTGGAAAGAGTAG 119895 | |||| | ||| | ||| |||||||| || |||||||||||||| | | Sbjct 552 TGCGCTGG-TACAGCTGGCAGGAGAGCTTGCCGTCGGCGACGTAGAACTGGAAGAAAGCG 494 Query 119896 TGACACGGAGGAAGAGACATCGATTCG--ATCTCAGGGACGTTCCATGCAGAAACCATGT 119953 || ||||| | || | |||| | || || || | ||||||||| || ||||| ||| Sbjct 493 TGGCACGGCGCCAGGGCCATC--TGCGGAATGTCGGCGACGTTCCACGCCGAAACGATGA 436 Query 119954 GGCGCCG 119960 ||||| Sbjct 435 TCCGCCG 429 >seq6140 Length=1248 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 120232 CCTTCCAGGAACCAGAGAAGCTCGCTTACGACGGCTTCCCACTGCAGCTTCTTGGTAGTC 120291 |||| ||||||||| || |||||| | || || || ||||| |||||||| ||| Sbjct 820 CCTTTCAGGAACCACAGCAGCTCGTGGATGATGGATTTGAGATGCAGTTTCTTGGTCGTC 879 Query 120292 ATTGCAGGAAAGCCTTTGGCCAGATCAAAGCGGATCTGACGACCGAAAACAGATCGTGTG 120351 | |||||||| || | |||||| || || ||||| |||||||| || |||||| Sbjct 880 AGGGCAGGAAAACCCGCCGACAGATCGAATCGCATCTGGTAGCCGAAAACGGAACGTGTG 939 Query 120352 CCTGTACCCGTTCGGTCTCCAGCGTCTACACCG 120384 ||||| || || ||||| || ||| || ||| Sbjct 940 CCTGTCCCGGTACGGTCGCCGCGGTCGACGCCG 972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477286030484400