Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_028768.1 Length=49714 Score E Sequences producing significant alignments: (Bits) Value seq1315 104 7e-18 seq377 104 7e-18 >seq1315 Length=29597 Score = 104 bits (114), Expect = 7e-18 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 36081 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTACCT 36140 |||||||||||| ||||||||||||| |||||| ||| ||||||| ||| ||||||||| Sbjct 2803 TGGTCGGAGTACAAGGATTCGAACCTTGGACCCCCTGGTCCCAAACCAGGTGCGCTACCG 2744 Query 36141 GACTGCGCTACACTCCGAAG 36160 | |||||| ||||||||||| Sbjct 2743 GGCTGCGCCACACTCCGAAG 2724 >seq377 Length=20736 Score = 104 bits (114), Expect = 7e-18 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 36081 TGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTACCT 36140 |||||||||||| ||||||||||||| |||||| ||| ||||||| ||| ||||||||| Sbjct 18568 TGGTCGGAGTACAAGGATTCGAACCTTGGACCCCCTGGTCCCAAACCAGGTGCGCTACCG 18509 Query 36141 GACTGCGCTACACTCCGAAG 36160 | |||||| ||||||||||| Sbjct 18508 GGCTGCGCCACACTCCGAAG 18489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158936762929560