Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_028813.1 Length=57766 Score E Sequences producing significant alignments: (Bits) Value seq3133 89.7 2e-13 >seq3133 Length=4061 Score = 89.7 bits (98), Expect = 2e-13 Identities = 126/176 (72%), Gaps = 6/176 (3%) Strand=Plus/Minus Query 39817 TGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGGAGGAAACGCGAAACCCGCA 39876 ||| | ||| ||||||||| |||||| || |||||||||||| ||| ||| Sbjct 1528 TGCGCGCAGACCGATCCCGAAGCGTTCTTTCCTGAAAAGGGAGGATCGACGAGGGAAGCA 1469 Query 39877 AAGCGGATCTG---CGGTATGTGCGACGTCCGGGACGAATGCCTTCAGTGGGCGCTGGAC 39933 || |||||||| |||| || || || || ||||| ||||| ||| ||||| | Sbjct 1468 AAACGGATCTGCCTCGGT---TGTGAAGTTCGTGACGAGTGCCTCGAGTACGCGCTCGCG 1412 Query 39934 AACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCGTGAACGCCGACCACT 39989 ||| |||||| |||||| |||| || || |||||||||| || || || | ||| Sbjct 1411 AACGACGAACGGTTCGGAATCTGGGGAGGGTTGTCCGAGCGCGAGCGTCGGCGACT 1356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184698877735680