Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_028834.1 Length=48216 Score E Sequences producing significant alignments: (Bits) Value seq1315 104 7e-18 seq377 102 3e-17 >seq1315 Length=29597 Score = 104 bits (114), Expect = 7e-18 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 36267 TTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGC 36326 |||||||||||||| ||||||||||||| |||||| ||| ||||||| ||| |||||| | Sbjct 2805 TTTGGTCGGAGTACAAGGATTCGAACCTTGGACCCCCTGGTCCCAAACCAGGTGCGCTAC 2746 Query 36327 CAGACTGCGCTACACTCCGAAAACC 36351 | | |||||| |||||||||| ||| Sbjct 2745 CGGGCTGCGCCACACTCCGAAGACC 2721 >seq377 Length=20736 Score = 102 bits (112), Expect = 3e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 36267 TTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTGC 36326 |||||||||||||| ||||||||||||| |||||| ||| ||||||| ||| |||||| | Sbjct 18570 TTTGGTCGGAGTACAAGGATTCGAACCTTGGACCCCCTGGTCCCAAACCAGGTGCGCTAC 18511 Query 36327 CAGACTGCGCTACACTCCGAAAAC 36350 | | |||||| |||||||||| || Sbjct 18510 CGGGCTGCGCCACACTCCGAAGAC 18487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154143960150180