Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_028878.1 Length=76271 Score E Sequences producing significant alignments: (Bits) Value seq4143 86.0 3e-12 seq3671 82.4 4e-11 >seq4143 Length=2504 Score = 86.0 bits (94), Expect = 3e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 66127 GTGCCCCCACAAGGGATCGAACCTTGGACCCGATGATTAAAAGTCACCTGCTCTACCAAC 66186 |||| |||||| || ||||||| |||||| ||||||| |||||| |||||||||||| Sbjct 1484 GTGCGCCCACAGGGACTCGAACCCCGGACCCAGTGATTAAGAGTCACTTGCTCTACCAAC 1425 Query 66187 TGAGCTATAGGGGCGCG 66203 ||||||||||| || || Sbjct 1424 TGAGCTATAGGCGCTCG 1408 >seq3671 Length=2510 Score = 82.4 bits (90), Expect = 4e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 62879 TGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAATCCTG 62938 |||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||| Sbjct 798 TGTAGCGCAGCTTGGTAGCGCATCCGCTTTGGGAGCGGAGGGTCGCAGGTTCAAATCCTG 857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243900762462760