Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq367 104 5e-18 >seq367 Length=135625 Score = 104 bits (114), Expect = 5e-18 Identities = 274/411 (67%), Gaps = 12/411 (3%) Strand=Plus/Minus Query 21604 TTCGCGCCCGGCTCCGTGTTTCACCTGCTGGAGCCGGATATCAATCAGGAGCTGTACGGC 21663 || || ||||| || | | ||| ||| ||| | |||||||| ||||| | |||||| Sbjct 45490 TTTGCCCCCGGTTCGATCTGCCACTTGCGCGAGGCCGATATCAACCAGGAAATCTACGGC 45431 Query 21664 CTGCCGGAATATCT--CAGCGCCCTTAACTCTGCCTGGCTGAATGAGTCGGCCACGCTGT 21721 |||||||| | || |||||| || || ||| || ||| |||||||||| Sbjct 45430 CTGCCGGAGTGGCTGGCAGCGCTGCAAAGC--GCACTGCTCAACGAGAGCGCCACGCTGT 45373 Query 21722 TCCGCCGCAAGTATTACGAAAACGGCGCTCATGCCGGATACATCATGTATGTCACCGATG 21781 |||| |||||||| ||| | |||||| |||||||| | ||| |||| | ||||| | Sbjct 45372 TCCGGCGCAAGTACTACAACAACGGCAGCCATGCCGGTTTCATTCTGTACATGACCGACG 45313 Query 21782 CCGTGCAGGATCGCAACGATATCGAAATGCTTCGCGAAAACA-TGGTTAAGTCGAAAGGC 21840 | | |||| | | || ||||| || ||| | || || || |||||||| Sbjct 45312 CGGCGCAGAAGGAAGAGGACATCGACTCACTGCGC-ACCGCACTGAAGAACTCGAAAGGG 45254 Query 21841 CGCAACAACTTTAAAAACCTGTTTCTCTATGC-CCCACAGG--GGAAAGCCGACGGCATT 21897 | ||||||| ||||||||| | || || || |||| |||| ||||||||| Sbjct 45253 CCAGGCAACTTTCGCAACCTGTTTGTGTACGCGCCGGCAGGCAAGAAA---GACGGCATT 45197 Query 21898 AAAATTATCCCCCTCAGTGAAGTGGCGACGAAGGACGAtttttttAATATCAAAAAAGTC 21957 | | ||||| | || || || ||| | |||||||| || |||||||| || Sbjct 45196 CAGCTCATCCCGGTGAGCGAGGTTGCGGCCAAGGACGAATTCAGCTCGATCAAAAACATC 45137 Query 21958 AGCGCCGCAGATCTCCTGGACGCACACCGCATCCCCTTTCAGTTGATGGGC 22008 ||| | ||||| || | || ||||| || |||||||||||| Sbjct 45136 AGCCGTGACGATCTGCTCGCGGCGTTGCGCATTCCACCGCAGTTGATGGGC 45086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104421030914970