Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_029003.2 Length=29733 Score E Sequences producing significant alignments: (Bits) Value seq367 147 4e-31 >seq367 Length=135625 Score = 147 bits (162), Expect = 4e-31 Identities = 237/341 (70%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 432 AAGTCATCCTTTGTGGCGACTTCGCTCAATGGCACGATTTTGATGCCGTCCGGTTTTCCG 491 || || ||||| | || || ||||||| || | || | |||||||| || || Sbjct 45156 AATTCGTCCTTGGCCGCAACCTCGCTCACCGGGATGAGCTGAATGCCGTCTTTCTTGCCT 45215 Query 492 CCGGGAGCGTAGAAAAACAGGTTTTTAAAGTTGCCGAGCCCTTTCGAGTTACGCATCGCC 551 | || ||||| | ||||||||| ||||||||| ||||||||||||| || || Sbjct 45216 GCCGGCGCGTACACAAACAGGTTGCGAAAGTTGCCTGGCCCTTTCGAGTTCTTCAGTGCG 45275 Query 552 TCGCGCAGCGATTCGACGTCGGTCGCGCTCTGCGCCGGGTCAGTCACATACATGATGTAA 611 |||||| || |||| ||| | ||||||||| ||| |||| |||| ||| || Sbjct 45276 GTGCGCAGTGAGTCGATGTCCTCTTCCTTCTGCGCCGCGTCGGTCATGTACAGAATGAAA 45335 Query 612 CCTGCGTGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGCGTCGCGGATTCATTCAGC 671 || || || |||||| | ||| |||||||| ||||||||||| ||| || || ||| Sbjct 45336 CCGGCATGGCTGCCGTTGTTGTAGTACTTGCGCCGGAACAGCGTGGCGCTCTCGTTGAGC 45395 Query 672 CATGCGGAATTAAGCGCGCTGAGATATTCAGGCAGGCCGTAAATCTCCTGATTAATATCA 731 |||| | ||||| || | || ||||||||||| || ||||| || ||||| Sbjct 45396 AGTGCGCTTTGCAGCGCTGCCAGCCACTCCGGCAGGCCGTAGATTTCCTGGTTGATATCG 45455 Query 732 GGCTCCAGCAGGTGGAACACGGTATCGGGTGCGAACTCATG 772 | ||| ||| |||| | | | | |||| || || ||||| Sbjct 45456 GCCTCGCGCAAGTGGCAGATCGAACCGGGGGCAAATTCATG 45496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95008196617950